Transcript Information: R_Transcript_76819.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84059688607257
Replicate 21.3813355537038
Replicate 31.5070222102732
Condition 2: 8 Hour
Replicate 11.2887297340655
Replicate 21.0297774532125
Replicate 30.47767396369439
Condition 3: 24 Hour
Replicate 10.45311461633626
Replicate 20.58040154975203
Replicate 31.0079864000545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76819.p1 GENE.R_Transcript_76819~~R_Transcript_76819.p1 ORF type:5prime_partial len:152 (+),score=3.51,zf-RVT|PF13966.2|4.6e-15,zf-RVT|PF13966.2|1.1e+04 R_Transcript_76819:3-458(+)
TTAATGACCGAGCTGACATTCGAAGATGGAAGGGGGACTCTACTGGGATTTTCTCCTGCAAGTCTTTTCTTCGCTGCCTTGGGAATACTCGTGAGACTACCTTCCTTGATCTGGAAGGCGAAGGCACCTCTTAAAGTGAGGGGCTTTACCTGGACCCTTGCTCTGAATAGGATCAATACTAACGACATGATACAACATCGACATCCGGGGTGGTGCCTCTCTCCTAATGTTTGTGTGATGTGTGGGGCGGATGGTAAGTCAGCTGCTCATTTATTTTTGCATTGCAAGCAGGTGTGGGCTCTTTGGAGCAAACTCTTCGGTGTGAGGGGGGTGTGGGTGTTCCCCGCAACGATCCTTGACTTTCTGCAGATTCGTCATACGGGATTCGGGTGCGATAAGGAGTTATGGATCCTTTGGAGGAACGCTCTGGTGCATCTGGTTGGAACGGAACCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76819.p1 GENE.R_Transcript_76819~~R_Transcript_76819.p1 ORF type:5prime_partial len:152 (+),score=3.51,zf-RVT|PF13966.2|4.6e-15,zf-RVT|PF13966.2|1.1e+04 R_Transcript_76819:3-458(+)
LMTELTFEDGRGTLLGFSPASLFFAALGILVRLPSLIWKAKAPLKVRGFTWTLALNRINTNDMIQHRHPGWCLSPNVCVMCGADGKSAAHLFLHCKQVWALWSKLFGVRGVWVFPATILDFLQIRHTGFGCDKELWILWRNALVHLVGTEP*

Click here to download the sequence:
Link to NCBI Protein BLAST