Transcript Information: R_Transcript_76829.p1


Annotated TAIR IDAT3G15070.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5070472-5072344 | Reverse length=486
E-Value7.2E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.115226788851
Replicate 211.387182748299
Replicate 314.982244589916
Condition 2: 8 Hour
Replicate 113.676789429993
Replicate 216.518849648443
Replicate 319.263601180915
Condition 3: 24 Hour
Replicate 115.305204818469
Replicate 213.15367692393
Replicate 316.248169965769


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76829.p1 GENE.R_Transcript_76829~~R_Transcript_76829.p1 ORF type:complete len:555 (+),score=122.62,zf-RING_2|PF13639.2|4.6e-12,zf-rbx1|PF12678.3|4.2e-08,zf-C3HC4|PF00097.21|1.3e-07,zf-RING_11|PF17123.1|3.7e-06,zf-RING_11|PF17123.1|6.6e+03,zf-C3HC4_2|PF13923.2|1.2e-05 R_Transcript_76829:477-2141(+)
ATGAATGAAAGGAATATGTTATGTAGTAGCCATCAGATCCTTGATTTTGTGAATGGGCAGCAAGCTCAGAGCCATCTCCATCCTGAGCCCTGTGTTCTCCTGGGCAGCACATCAAGCTTTCCCCCGTCAACTATCAATTCTGTCTTACCACCTTCAGGAAATATGAACAACTTTGATCTCCATCATTTGCCAGAGCATCATGGTGGTCCTGCTTTTTATGGAATGGCACAGTATAGTCAGCCGAACCACCCTGCAACAAATCTTGAATTAGGTGTTCCTACAGCATCTAGCTTCTTTAATGCTCACATGAACCCCGCATCTGGTGCAAGAGTGTTCCCTGTTCCTCTTAACCATGGTTTTGTGGATCAATTACCATCTTCTAGCAATCACAGAGGTAATGCGATTCCCTTTAGTGAGCATGGAATGGGTAATTTCTCAACAGATGGTGCTAGAGGCATATGTAAGAGAAAGAATGCTGAAGGCATCCCTGGGAACGTTCAGCATTTTGGTTCTTCTGCAGGACCTAGTAGTTCTTCAGCTATACCAATGACAAGCTGTCATTTTGATTCTGGTGCTGCTGCTTTAGAAGCCCCAACTGCCTTGTCCGACTATAGTGGTAATGGCTCTCCCCCAATCATGGAAGTAGGTTCAGGAAGTTCTGGCAGGCACAGATCTGGTGCTGTTGGACTTCATATGGATTCTGCTATGGTACATAACTATAATTATCTACGACAAGGGAATTACGGGGGCCAACCGTTTCAGCCATCCAGTTGTACATGGTTGGAACAACCCCCAATTAACAATGGTGGTGCTTTTTCATGGAGTGCACCTCCTCTGTTGCCTTATTTTCAAGGTAGCAATATGCATGGGGGCTCTTCTGAGATGGGAAATGCTGGTCTACCTGGATATCCTGAGGCGTCTAACAGTCATGGCTCTGCAAGTTTCTTGCATTCACCACCCATGCTTCCACAACACCACAATCTTCATCCATCGCAAAATATCTCTGGAGTGAGAAGATATGGTGTTGCTTGCTATCCTCCTTTCCCTCCTCCAGCTCCAAGTGGAGTTCCTACAAATGATGGTATTCAGCATGATCCCCTATGTCTCCCCCAAGAAAGTGCAGAGCCAGCAAGTCGACCAACAGGGATTAGGATATACCGGTCTCATGGAAGAAGCCTCTTGCCTGATGCAGCTTCTAGGCGCCGCGATCTTCCTCGGTTAAGGACTCTCCCTGCCGATAGAGTTGCACTTTTGGAATTCCCAAGTTTCTATGAAGTAGATTATGAAGTAGACAATTTCATCGATCATCACAGAGATATGCGGTTGGATATTGACGACATGTCATATGAGGAGCTTCTTGCTTTGAGTGAGCGGATTGGAACTGTAAACACTGGACTTTCAGAGGAAGACATCACACGCCATCTTAAAACCAGACTATATAGTTCAACTTCAGCTGCTATCAATCTGGAGGAGTTGCCTTGTGTCGATCAGAACAATGATTCATGCATCATATGTCAGGATGAATACGAGGACAAAGCCAAGCTGGGAACCCTAGAGTGTGGACATGAGTACCATGTTGATTGCTTGAAGAAATGGCTGATTGTGAAGAACGTCTGCCCCATTTGCAAATCATCCGCCTTGACTGTGGAGCACAAGGTCCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76829.p1 GENE.R_Transcript_76829~~R_Transcript_76829.p1 ORF type:complete len:555 (+),score=122.62,zf-RING_2|PF13639.2|4.6e-12,zf-rbx1|PF12678.3|4.2e-08,zf-C3HC4|PF00097.21|1.3e-07,zf-RING_11|PF17123.1|3.7e-06,zf-RING_11|PF17123.1|6.6e+03,zf-C3HC4_2|PF13923.2|1.2e-05 R_Transcript_76829:477-2141(+)
MNERNMLCSSHQILDFVNGQQAQSHLHPEPCVLLGSTSSFPPSTINSVLPPSGNMNNFDLHHLPEHHGGPAFYGMAQYSQPNHPATNLELGVPTASSFFNAHMNPASGARVFPVPLNHGFVDQLPSSSNHRGNAIPFSEHGMGNFSTDGARGICKRKNAEGIPGNVQHFGSSAGPSSSSAIPMTSCHFDSGAAALEAPTALSDYSGNGSPPIMEVGSGSSGRHRSGAVGLHMDSAMVHNYNYLRQGNYGGQPFQPSSCTWLEQPPINNGGAFSWSAPPLLPYFQGSNMHGGSSEMGNAGLPGYPEASNSHGSASFLHSPPMLPQHHNLHPSQNISGVRRYGVACYPPFPPPAPSGVPTNDGIQHDPLCLPQESAEPASRPTGIRIYRSHGRSLLPDAASRRRDLPRLRTLPADRVALLEFPSFYEVDYEVDNFIDHHRDMRLDIDDMSYEELLALSERIGTVNTGLSEEDITRHLKTRLYSSTSAAINLEELPCVDQNNDSCIICQDEYEDKAKLGTLECGHEYHVDCLKKWLIVKNVCPICKSSALTVEHKVR*

Click here to download the sequence:
Link to NCBI Protein BLAST