Transcript Information: R_Transcript_76850.p1


Annotated TAIR IDAT5G12080.1
Annotated Gene Namemechanosensitive channel of small conductance-like 10
Annotated Gene Symbol(s)MSL10, ATMSL10
Annotation TypeHomolog
Chromosome Positionchr5:3898182-3900923 | Reverse length=734
E-Value6E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6046898191417
Replicate 24.9728079933337
Replicate 35.5759821780108
Condition 2: 8 Hour
Replicate 18.6344892182391
Replicate 211.298129772388
Replicate 313.804777550768
Condition 3: 24 Hour
Replicate 13.8363704183137
Replicate 23.3082888335866
Replicate 33.8879475430673


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76850.p1 GENE.R_Transcript_76850~~R_Transcript_76850.p1 ORF type:complete len:760 (+),score=128.33,MS_channel|PF00924.14|8.3e-22 R_Transcript_76850:388-2667(+)
ATGGAGGTTAGTGATGTTATAGTATCAATTGCAGCTAATAATGGTGATGCAAAGAAAGGAAATGATGGTTCAAGCTATGCAAGCACTTCCCAAGAGGGGTTTGCCTTCCAATCATCGAAAAAGATGGTCTATGACACAGGCAACAAGTCCCCAGATCAGAAAAATATCAATGTTACAAAGATGAGTCCTTCATCGACTCCCAATAGACCTCCAAAAAGCCCGAATTATGAGTTTGTTAGAAGGCGCCCTTCATTGGCTAGGTCGGCTTTCTCAAGGCCTAAGTCGAGATTAGTTGAGCCACCGTATCCTAGTGATCATGCTTCTCTAATCGAAGATCAGGAGAGTGCTCATACTCGTGTGGAACTAGCTTCAAACTCGCCTCTTAGGAATTCATCAAAGAAGGTTTCACCAAGCCGAGTTAGTACCCCAAGAACTCCGGTGTTCCCAAGAACACCAGTAGGAGATCATGAGGAGGAGGAGGAGGAAGAGGATGTCTACAAGTCCATCGATCTTCAAGGGAAGGAACGGTCTAATAAGATATCGAGAGCTCTTGCATTTTTAGAGTTAATAGTACTCATTAGCTTGATTGGTCTACTAATTGCTAGCTTAACCTTGCTCCGTTTGCAACATACTTATTTGTGGAGTTTACCACTTTGGAGATGGTGTGTGCTTGTTATGGTAATCTTTTGTGGTCGATTAGTCTCGAAATGGTTTATCAATGTCCTTGTTTTCCTGGTGGAAAGGAACTTCTTGCTCAAGAAGAAAGTTCTGTATTTTGTGTATGGGCTAACAGGAAGTGTCAAGGTTTTCGTTTGGTTGGGTTTTATACTTTTAGCATGGGTTTTGTTGTTCATTCATGGGATCAAGAGGTCAACTAGGACCCAGGAAATTTTACATTATATGACAATGGGGCTTGCTGGGTGTCTAGTTGGGGCCGGTATATGGCTATTCAAGACGCTATTGATAAAGACTATAGCTCTCTCATTCCATGTAAACAGATTCTTTGATCGAATTCAGGAGTCCTTATTTCATCAATATGTGCTTCAAACACTTTCTGGCCCTCCATTGATGGAGATGGAAGAAGTGGTAGCGAGATCAGGAACTAGTGGCCGGTTGAGTTTTGAGCGAATGTCAAAAAGGAAAGGTGCAAAAGAGGAGGTGATTGATATAGAGAAGCTTCAGAAAATTAACCAAGATAGGGTTTCTGCTCGGACCATGAAGGGTTTGATCAATGTGATTAGGAGAACAAGGCTGTCTACTATTTCCAATTGCCTTGACTATGATAAAGAAGATCAAAGGGGTGAGCAAACAAAAGAGATTACAAGCGAGTGGGAAGCCAAAGTTGCTGCTGAAAAGATATTCAAAAATGTCGTTAGGCCTGGTCACAAGTGTATCGGCGAGGAAGATCTCTTACGTTTCATGAAAATGGATGAGGTGAACCAAGTATTCCCTTTGTTTGAGGGAGCCAACGAAACTGGAAAGATCAAAAAATCAGCTCTGATGAAGTGGGTGGTTAATGCTTACTTGGAACGCAAATCCCTTGCTCATTCGTTAAATGACACTAAAACAGCTGTGGAGGAGTTGAATAGAATAGCTTCAGGCGTTGTTTTGGTTGCTGTTGTTATTGTGTGGAATCTTATGATGGGATTCTTGACCACCAAAATACTTGTCTTCATCTCATCTCAGCTGTTGCTTGTGGTGTTTATGTTTGGCAATACTGTCAAGACTGTGTTTGAAGCGATTATATTTGTGTTTGTAATGCATCCCTTCGATGTGGGTGACCGTTGTGTGATCGATGGAGTTCAGATGATTGTTGAGGAGATGAACATACTGACCACAATCTTTTTGAGATATGATAATGAGAAGATTATTTATCCGAATACTGTTTTGGCAACCAAACCTATCAGCAACTTCTACCGGAGCCCAGAAATGAGTGATTCGGTCGAGTTTGCTATCGACTTCTCCACTACAGTTGAGACCATTGCTGCTTTGAAAGCTAGAATCAAAGCGTATATCGAAAGCAAACCCCAATACTGGCGACCAAGTCATAGCGTGCAAGTGAAAGACCTTCTGGATATGAGCAAGTTGAAGATTGGTTTGTACGTAAACCACACAATCAACTTCCAGAACAGCGGGGAGAGATACAGCAGAAGATCTGAACTTGTCCTGGAACTGAAGAAAATCTTAGAAGAGCTTGGAATCGGATATCATCTTCTGCCTCTGGATGTTCGTGTTACACATGTTGGGTCACCAGCTTCTACATCTATTCCTCACTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76850.p1 GENE.R_Transcript_76850~~R_Transcript_76850.p1 ORF type:complete len:760 (+),score=128.33,MS_channel|PF00924.14|8.3e-22 R_Transcript_76850:388-2667(+)
MEVSDVIVSIAANNGDAKKGNDGSSYASTSQEGFAFQSSKKMVYDTGNKSPDQKNINVTKMSPSSTPNRPPKSPNYEFVRRRPSLARSAFSRPKSRLVEPPYPSDHASLIEDQESAHTRVELASNSPLRNSSKKVSPSRVSTPRTPVFPRTPVGDHEEEEEEEDVYKSIDLQGKERSNKISRALAFLELIVLISLIGLLIASLTLLRLQHTYLWSLPLWRWCVLVMVIFCGRLVSKWFINVLVFLVERNFLLKKKVLYFVYGLTGSVKVFVWLGFILLAWVLLFIHGIKRSTRTQEILHYMTMGLAGCLVGAGIWLFKTLLIKTIALSFHVNRFFDRIQESLFHQYVLQTLSGPPLMEMEEVVARSGTSGRLSFERMSKRKGAKEEVIDIEKLQKINQDRVSARTMKGLINVIRRTRLSTISNCLDYDKEDQRGEQTKEITSEWEAKVAAEKIFKNVVRPGHKCIGEEDLLRFMKMDEVNQVFPLFEGANETGKIKKSALMKWVVNAYLERKSLAHSLNDTKTAVEELNRIASGVVLVAVVIVWNLMMGFLTTKILVFISSQLLLVVFMFGNTVKTVFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDNEKIIYPNTVLATKPISNFYRSPEMSDSVEFAIDFSTTVETIAALKARIKAYIESKPQYWRPSHSVQVKDLLDMSKLKIGLYVNHTINFQNSGERYSRRSELVLELKKILEELGIGYHLLPLDVRVTHVGSPASTSIPHY*

Click here to download the sequence:
Link to NCBI Protein BLAST