Transcript Information: R_Transcript_76879.p1


Annotated TAIR IDAT5G06310.1
Annotated Gene NameNucleic acid-binding, OB-fold-like protein
Annotated Gene Symbol(s)AtPOT1b
Annotation TypeOrtholog
Chromosome Positionchr5:1928468-1930795 | Forward length=454
E-Value4.2E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0702669318663
Replicate 24.755572316512
Replicate 34.6988179684415
Condition 2: 8 Hour
Replicate 15.0750617518863
Replicate 25.7335594464578
Replicate 35.5075399745619
Condition 3: 24 Hour
Replicate 15.4451209450324
Replicate 24.2413959404956
Replicate 35.565463371241


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76879.p1 GENE.R_Transcript_76879~~R_Transcript_76879.p1 ORF type:complete len:468 (+),score=75.12,POT1|PF02765.13|7.8e-30,POT1PC|PF16686.1|14,POT1PC|PF16686.1|1.4e-06 R_Transcript_76879:159-1562(+)
ATGGGAAAGTTAAACAAATATGACTACAGGTATCTGAAACTAGCAGATGCTCTGCTTGCTGTCAACCAGAAAGTCAATCTCTTTGGTGTTGTTGCTGAGTATACCATCCCTAAACGCAGCAAAGGCACAGATTGGTTTTGTTCATTGAGAATAGTGGATGAAACACATCACAGCAGTGGAATGTTAGTGAATTTCTTCGCTGCAACTGTAGAGAAGCTCCCTCAAGTTCAGGCATCTGGAGATATAATTCAGCTTTGTCAAGTTCAGATGAAAACTCATAACAATGAGACCTATGCTCTTTTCAACAAAAGATTTTCTTCATTTGCTCTGCATGAAGGGAAATATGGTCAGAGCCTTAATCCTTACCAATCTTATTTAAAGTGTCCACCTAGAAACCAGGATATGATTCTTGTAGCTGACCTCAGAAAGTGGATTGATGGCTTCCAGCTTGATACAGTGTCGAAGGAGTCTGTGTTGTTTAGACAAATCAAGGAAGGAGAGGGTCACGATCTTGTATGCAAGATTCTTCATGTGTCTGAAGTTACTAAAGATAACTGGATGCTGTATGTTTGGGATGGAAGTGATGCTCCTCAGCTTCAAATAAACTCGAGACTCGAAGATGAAGAGGCAAGCCCCCTTCCGCTACAATTGGAACATCAGCCTTTGCCCAGGGATACCTTGTGTAAGTTTCCTACTGTGGGAACAATCCTAAGAGTGTTTGTTGACCAAAGAAATGCAAAGCTGAATCTCCCATCACTGAGTGCTGATAGATGGGTAAGAATTATCAATTTGACGCTAGAAGTTCATGAAGGTTTGTGGTGTGGTGTTCTAATGCCATCGACGAAAGTTCGTTTTGTTCCAAACGAGGATCCACATGTATTAGAGCGCCAAAGGGGTTCTGAAAAACGGGTGTCTTCGAAATGGGATCGTATGCCGTTTACTAGCTTTCCTTGGCCTTCTTCTATTACAGAATTGGAATCTGAAATTGAAGAGGTACCACCTTGCACACTAATGGACTGCATAACTTTCCCACAGGTTACTGCAAAGTTCAAATGCGTAATTCGAGTTGTAGCAGCACTTCCATGGAAGGTTGAGGACTTCCGATCTCCAAGTGGAACCTATCGTATTCGTCTTACATTAGAAGATCCTACAGCAAGAATTCATGCTTACCTGTATGCTGATGATGCGGAAGTTTTCTTTGAAGAATGCGTTCTTGTCGATGAACTGACGAGAAAGTGGCATATGTTGCTTGGAGTCGCTAAAGTTGACAATGGCAATAAAACAGCGGAAGCCCCAAGAAATCCTCCATGGGTTCAGTGTTGTCTTAAATCATATTATCTCGACAAAAGTGATCCTTGGGGAAGTAGGAGCTACCGGATCTTTGGAACCAGGCTGGTATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76879.p1 GENE.R_Transcript_76879~~R_Transcript_76879.p1 ORF type:complete len:468 (+),score=75.12,POT1|PF02765.13|7.8e-30,POT1PC|PF16686.1|14,POT1PC|PF16686.1|1.4e-06 R_Transcript_76879:159-1562(+)
MGKLNKYDYRYLKLADALLAVNQKVNLFGVVAEYTIPKRSKGTDWFCSLRIVDETHHSSGMLVNFFAATVEKLPQVQASGDIIQLCQVQMKTHNNETYALFNKRFSSFALHEGKYGQSLNPYQSYLKCPPRNQDMILVADLRKWIDGFQLDTVSKESVLFRQIKEGEGHDLVCKILHVSEVTKDNWMLYVWDGSDAPQLQINSRLEDEEASPLPLQLEHQPLPRDTLCKFPTVGTILRVFVDQRNAKLNLPSLSADRWVRIINLTLEVHEGLWCGVLMPSTKVRFVPNEDPHVLERQRGSEKRVSSKWDRMPFTSFPWPSSITELESEIEEVPPCTLMDCITFPQVTAKFKCVIRVVAALPWKVEDFRSPSGTYRIRLTLEDPTARIHAYLYADDAEVFFEECVLVDELTRKWHMLLGVAKVDNGNKTAEAPRNPPWVQCCLKSYYLDKSDPWGSRSYRIFGTRLVC*

Click here to download the sequence:
Link to NCBI Protein BLAST