Transcript Information: R_Transcript_76987.p1


Annotated TAIR IDAT2G17790.1
Annotated Gene NameVPS35 Homolog A
Annotated Gene Symbol(s)VPS35A, ZIP3
Annotation TypeOrtholog
Chromosome Positionchr2:7733685-7739344 | Forward length=787
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.384100783864
Replicate 214.663594873462
Replicate 320.424894869776
Condition 2: 8 Hour
Replicate 115.630801049779
Replicate 219.316135119033
Replicate 326.921788518963
Condition 3: 24 Hour
Replicate 123.932589672219
Replicate 220.537547078195
Replicate 326.374203451415


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76987.p1 GENE.R_Transcript_76987~~R_Transcript_76987.p1 ORF type:complete len:683 (+),score=138.91,Vps35|PF03635.13|7.2e-254 R_Transcript_76987:248-2296(+)
ATGATTGCCGACGGAGTTGAAGAGGAAGAGAAATGGCTCTCCGCCGGGATCGCCGGTCTTCAACAGAACGCCTTTTACATGCATCGCGCTCTGGATTCGAACAATCTCAAAGACGCCTTGAAATACTCCGCTCAAATGCTTTCCGAGCTTCGCACTTCTAGACTCTCTCCTCACAAGTATTATGCTCTTTATATGCGTGCATTTGACGAATTGAGGAGATTGGAGCTGTTCTTTTTTGAAGAGACCAAGCGAGGTTGTTCCATCATTGAGCTTTATGAGCTTGTACAGCATGCCGGCAACATCCTTCCTCGACTGTATCTTCTGTGTACTGTAGGATGTGTCTATATTAAATCAAAGGAAGCTCCTGCAAAAGATATCCTTAAGGATTTAGTAGAAATGTGCCGTGGCATTCAACATCCTTTACGCGGGCTCTTCTTGAGGAGTTATCTTTCTCAAGTCAGTAGGGATAAGTTACCGGATATTGGCTCCGAGTATGAAGGGGATGCTGATTCTGTCACAGATGCAGTTGAGTTTGTTCTGCAAAATTTTACAGAAATGAATAAGCTTTGGGTTCGGATGCAGTACCAGGGACCTGCTCGGGAGAAGGACAGAAGAGAAAAAGAAAGGAGCGAACTTCGAGATCTTGTTGGGAAGAATCTGCATGTCCTAAGTCAGATTGAGGGAGTTGATCTTGACATGTACAGAGATACCGTTCTTCCTAGAGTACTGGAACAGGTGGTCAATTGTAAAGATGAGCTTGCTCAGTATTATCTGATGGACTGCATCATCCAAGTATTTCCTGATGAGTATCATTTGCAAACTCTTGATGTCTTATTGGGCGCTTGTCCCCAGCTTCAGCCATCTGTGGATATCAAGACAGTTCTCTCCAGTTTGATGGAAAGGCTTTCAAATTATGCTGCCTCCAGTGCAGAAGTCTTGCCAGACTTCTTGCAAGTGGATGCCTTTTCAAAACTAAACAATTCAATAGGGAAGGTCATAGAAGCTCAGGCTGATATGCCTGTTGTAGCTGTTGTTACTTTGTATTCATCTCTTCTTACCTTCACCCTACATGTTCATCCTGATCGGCTTGATTATGCTGATCAAGTATTGGGGTCCTGTGTTAATAAGCTTGCTGTTGTTGGAAAACTTGATGATACCCAAGCAACAAAGCAAATAGTTACACTTCTAAGTGCTCCATTGGATAAGTATAATGATGTAATGACTGCTTTGAAGCTCTCTAACTATCCACGAGTGATGGAGTACCTTGACTATGAAACCAATAAGGTCATGGCAAAGATTATAATTCGAAACATCATGAAAAACAGCTCCTATATATCTAACAGTGATAAGGTCGACGCATTGTTTGAGTTGATAAAGGGGCTTATCAAGGACACTGATGTCACCGTTTATGATGAGGATGACGAGGACTTTAAGGAGGAGCAGAATGCTGTTGCACGACTTATCCAAATGCTTGACAGTGATGAACCGGAAGAGATGTTCAAGATCATAACTGTTGTGCAGAAGCACATATTGGCGGGTGGTGTGAAGCGTTTACCCTTCACGGTTCCGCCCCTTGTTTTCTCCTCTCTTAAGCTGGTTAGGAGGCTTCAGAACCAAGATACGAGTAAACTTGGAGAAGCAGCTGCATCAACACAAAAGAAAATTTACCAGTTGTTAAATCAGCTTATTGAGGCTCTCTCACATGTTTCGGCGCTTGAGCTGGCCTTGCGTCTGTACTTGCAATGCGCCGAGGCTGCAAATGATTCTGACCTTGAACCTGTTGCCTGTGAATTTTTCACTCAAGCCTATATCTTATATGAGGAAGAGATATCGGACTCCAGAGAACAGGTGACTGCATTATACCTGATAATAGGGACTCTTCAAAGAATGCATGTCTTTGGGGTTGAGAACAGGGATACTTTGACGCACAAAGCCACAGGGTATTCAGCAAAGCTGTTGAAAAAACCTGATCAATGTAGAGCTGTTTACGCATGCTCACATCTCTTTTGGGCTGATGATCAGGATGGTGTAAGAGATGGGGAGAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76987.p1 GENE.R_Transcript_76987~~R_Transcript_76987.p1 ORF type:complete len:683 (+),score=138.91,Vps35|PF03635.13|7.2e-254 R_Transcript_76987:248-2296(+)
MIADGVEEEEKWLSAGIAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKYYALYMRAFDELRRLELFFFEETKRGCSIIELYELVQHAGNILPRLYLLCTVGCVYIKSKEAPAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADSVTDAVEFVLQNFTEMNKLWVRMQYQGPAREKDRREKERSELRDLVGKNLHVLSQIEGVDLDMYRDTVLPRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSSLMERLSNYAASSAEVLPDFLQVDAFSKLNNSIGKVIEAQADMPVVAVVTLYSSLLTFTLHVHPDRLDYADQVLGSCVNKLAVVGKLDDTQATKQIVTLLSAPLDKYNDVMTALKLSNYPRVMEYLDYETNKVMAKIIIRNIMKNSSYISNSDKVDALFELIKGLIKDTDVTVYDEDDEDFKEEQNAVARLIQMLDSDEPEEMFKIITVVQKHILAGGVKRLPFTVPPLVFSSLKLVRRLQNQDTSKLGEAAASTQKKIYQLLNQLIEALSHVSALELALRLYLQCAEAANDSDLEPVACEFFTQAYILYEEEISDSREQVTALYLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWADDQDGVRDGER*

Click here to download the sequence:
Link to NCBI Protein BLAST