Transcript Information: R_Transcript_76989.p1


Annotated TAIR IDAT2G17790.1
Annotated Gene NameVPS35 Homolog A
Annotated Gene Symbol(s)VPS35A, ZIP3
Annotation TypeOrtholog
Chromosome Positionchr2:7733685-7739344 | Forward length=787
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3222617384521
Replicate 20.79356096061599
Replicate 31.0822080754088
Condition 2: 8 Hour
Replicate 11.0796916827132
Replicate 21.3733454989075
Replicate 30.85755640726238
Condition 3: 24 Hour
Replicate 10.21692416278146
Replicate 21.7713672494794
Replicate 30.4825635679001


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76989.p1 GENE.R_Transcript_76989~~R_Transcript_76989.p1 ORF type:complete len:635 (+),score=125.09,Vps35|PF03635.13|1e-210,Vps35|PF03635.13|4.8e-05 R_Transcript_76989:248-2152(+)
ATGATTGCCGACGGAGTTGAAGAGGAAGAGAAATGGCTCTCCGCCGGGATCGCCGGTCTTCAACAGAACGCCTTTTACATGCATCGCGCTCTGGATTCGAACAATCTCAAAGACGCCTTGAAATACTCCGCTCAAATGCTTTCCGAGCTTCGCACTTCTAGACTCTCTCCTCACAAGTATTATGCTCTTTATATGCGTGCATTTGACGAATTGAGGAGATTGGAGCTGTTCTTTTTTGAAGAGACCAAGCGAGGTTGTTCCATCATTGAGCTTTATGAGCTTGTACAGCATGCCGGCAACATCCTTCCTCGACTGTATCTTCTGTGTACTGTAGGATGTGTCTATATTAAATCAAAGGAAGCTCCTGCAAAAGATATCCTTAAGGATTTAGTAGAAATGTGCCGTGGCATTCAACATCCTTTACGCGGGCTCTTCTTGAGGAGTTATCTTTCTCAAGTCAGTAGGGATAAGTTACCGGATATTGGCTCCGAGTATGAAGGGGATGCTGATTCTGTCACAGATGCAGTTGAGTTTGTTCTGCAAAATTTTACAGAAATGAATAAGCTTTGGGTTCGGATGCAGTACCAGGGACCTGCTCGGGAGAAGGACAGAAGAGAAAAAGAAAGGAGCGAACTTCGAGATCTTGTTGGGAAGAATCTGCATGTCCTAAGTCAGATTGAGGGAGTTGATCTTGACATGTACAGAGATACCGTTCTTCCTAGAGTACTGGAACAGGTGGTCAATTGTAAAGATGAGCTTGCTCAGTATTATCTGATGGACTGCATCATCCAAGTATTTCCTGATGAGTATCATTTGCAAACTCTTGATGTCTTATTGGGCGCTTGTCCCCAGCTTCAGCCATCTGTGGATATCAAGACAGTTCTCTCCAGTTTGATGGAAAGGCTTTCAAATTATGCTGCCTCCAGTGCAGAAGTCTTGCCAGACTTCTTGCAAGTGGATGCCTTTTCAAAACTAAACAATTCAATAGGGAAGGTCATAGAAGCTCAGGCTGATATGCCTGTTGTAGCTGTTGTTACTTTGTATTCATCTCTTCTTACCTTCACCCTACATGTTCATCCTGATCGGCTTGATTATGCTGATCAAGTATTGGGGTCCTGTGTTAATAAGCTTGCTGTTGTTGGAAAACTTGATGATACCCAAGCAACAAAGCAAATAGTTACACTTCTAAGTGCTCCATTGGATAAGTATAATGATGTAATGACTGCTTTGAAGCTCTCTAACTATCCACGAGTGATGGAGTACCTTGACTATGAAACCAATAAGGTCATGGCAAAGATTATAATTCGAAACATCATGAAAAACAGCTCCTATATATCTAACAGTGATAAGGTCGACGCATTGTTTGAGTTGATAAAGGGGCTTATCAAGGACACTGATGTCACCGTTTATGATGAGGATGACGAGGACTTTAAGGAGGAGCAGAATGCTGTTGCACGACTTATCCAAATGCTTGACAGTGATGAACCGGAAGAGATGTTCAAGATCATAACTGTTGTGCAGAAGCACATATTGGCGGGTGGTGTGAAGCGTTTACCCTTCACGGTTCCGCCCCTTGTTTTCTCCTCTCTTAAGCTGGTTAGGAGGCTTCAGAACCAAGATACGAGTAAACTTGGAGAAGCAGCTGCATCAACACAAAAGAAAATTTACCAGTTGTTAAATCAGCTTATTGAGGCTCTCTCACATGTTTCGGCGCTTGAGCTGGCCTTGCGTCTGTACTTGCAATGCGCTGAGGACTCCAGAGAACAGGTGACTGCATTATACCTGATAATAGGGACTCTTCAAAGAATGCATGTCTTTGGGGTTGAGAACAGGGATACTTTGACGCACAAAGCCACAAGGTATTCAGCAAGCTGTTTATGCATGCTCACATCTCTTTTGGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76989.p1 GENE.R_Transcript_76989~~R_Transcript_76989.p1 ORF type:complete len:635 (+),score=125.09,Vps35|PF03635.13|1e-210,Vps35|PF03635.13|4.8e-05 R_Transcript_76989:248-2152(+)
MIADGVEEEEKWLSAGIAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKYYALYMRAFDELRRLELFFFEETKRGCSIIELYELVQHAGNILPRLYLLCTVGCVYIKSKEAPAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADSVTDAVEFVLQNFTEMNKLWVRMQYQGPAREKDRREKERSELRDLVGKNLHVLSQIEGVDLDMYRDTVLPRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSSLMERLSNYAASSAEVLPDFLQVDAFSKLNNSIGKVIEAQADMPVVAVVTLYSSLLTFTLHVHPDRLDYADQVLGSCVNKLAVVGKLDDTQATKQIVTLLSAPLDKYNDVMTALKLSNYPRVMEYLDYETNKVMAKIIIRNIMKNSSYISNSDKVDALFELIKGLIKDTDVTVYDEDDEDFKEEQNAVARLIQMLDSDEPEEMFKIITVVQKHILAGGVKRLPFTVPPLVFSSLKLVRRLQNQDTSKLGEAAASTQKKIYQLLNQLIEALSHVSALELALRLYLQCAEDSREQVTALYLIIGTLQRMHVFGVENRDTLTHKATRYSASCLCMLTSLLG*

Click here to download the sequence:
Link to NCBI Protein BLAST