Transcript Information: R_Transcript_77017.p1


Annotated TAIR IDAT5G54970.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22313271-22313648 | Forward length=125
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0197184890904
Replicate 20.35189330306645
Replicate 30.38391180328747
Condition 2: 8 Hour
Replicate 10.13679254160472
Replicate 20.49968451041756
Replicate 30
Condition 3: 24 Hour
Replicate 10.64127953150011
Replicate 20.3696412104566
Replicate 30.61138839907534


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77017.p1 GENE.R_Transcript_77017~~R_Transcript_77017.p1 ORF type:5prime_partial len:179 (+),score=7.82 R_Transcript_77017:1-537(+)
CTCAGAACTCCAAATCTTCTCTCCTGGCTCCCTTCCTCTCTCTCCCTCTCACTTTCTCTCCCCTCCAAAGCTTCCCGCCGCTCTCTCATCTCTTATAAAAACAAAATCCCTCCCTCCATTTCATTCCACACTTTTTTACCCACAAAAAAATCCTCCCTTCAATTATTCGGTTTTCTTCCTCATAATCTCCTCCCCTCCTTTCCAAAAATGAAAAGGAAGATCCGAGTCAACTCGCCCTGGACTCACCGATTCAGTAAGTACTTAAAGCCCGGCGACCTGGCCCGCCTCAGGGACTCCCGGTTTCTCGCCGCCAGATCATCCCGACTCGTCTTCTCCACCACCACCACCACTCACCGAGTCGACTCGGAAACCACCCCGAGTCCCCAGACCGAGTCACTCCCCCAGTTCCGGAGTTTGGATTTTGGGCCCAGATGTTTTGGTAGAAAGAAGCTTGTTGCTGCTAAAAGGGTTTTCTCTAGTATTACTATAAACCCTGTCTCAGACCCTAATACTAGTAGTAATTTACTTGTTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77017.p1 GENE.R_Transcript_77017~~R_Transcript_77017.p1 ORF type:5prime_partial len:179 (+),score=7.82 R_Transcript_77017:1-537(+)
LRTPNLLSWLPSSLSLSLSLPSKASRRSLISYKNKIPPSISFHTFLPTKKSSLQLFGFLPHNLLPSFPKMKRKIRVNSPWTHRFSKYLKPGDLARLRDSRFLAARSSRLVFSTTTTTHRVDSETTPSPQTESLPQFRSLDFGPRCFGRKKLVAAKRVFSSITINPVSDPNTSSNLLVH*

Click here to download the sequence:
Link to NCBI Protein BLAST