Transcript Information: R_Transcript_77018.p1


Annotated TAIR IDAT5G54970.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22313271-22313648 | Forward length=125
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.295282515264
Replicate 22.2630742963675
Replicate 32.6061557744125
Condition 2: 8 Hour
Replicate 12.4925730784621
Replicate 22.2762574329351
Replicate 34.4563834457238
Condition 3: 24 Hour
Replicate 13.4367974891773
Replicate 25.282696740258
Replicate 33.4076665979601


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77018.p1 GENE.R_Transcript_77018~~R_Transcript_77018.p1 ORF type:5prime_partial len:167 (+),score=4.92 R_Transcript_77018:1-501(+)
CTTCTTCTCTTTCCCTCTCACTTTCTCTCTCCTCCAAATCTTCCCGCCTCTCTCTCATCTCTTATAAAAACAACCCCCCTCCATTTCATTCCACACATTTTTACCCACAAAAAATCCTCCCTTCAATTATTCGGTTTTCTTCCTCATAATCTCCTCCCCTCCTTTCCAAAAATGAAAAGGAAGATCCGAGTCAACTCGCCCTGGACTCACCGATTCAGTAAGTACTTAAAGCCCGGCGACCTGGCCCGCCTCAGGGACTCCCGGTTTCTCGCCGCCAGATCATCCCGACTCGTCTTCTCCACCACCACCACCACTCACCGAGTCGACTCGGAAACCACCCCGAGTCCCCAGACCGAGTCACTCCCCGAGTTCCCGAGTTTGGATTTTGGGCCCAGATGTTTTGGTAGAAAGAAGCTTGTTGCTGCTAAAAGGGTTTTCTCGAGTATTACTATAAACCCCGTCTCAGACCCTAACACTAGTAGTAATTTACTTGTTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77018.p1 GENE.R_Transcript_77018~~R_Transcript_77018.p1 ORF type:5prime_partial len:167 (+),score=4.92 R_Transcript_77018:1-501(+)
LLLFPSHFLSPPNLPASLSSLIKTTPLHFIPHIFTHKKSSLQLFGFLPHNLLPSFPKMKRKIRVNSPWTHRFSKYLKPGDLARLRDSRFLAARSSRLVFSTTTTTHRVDSETTPSPQTESLPEFPSLDFGPRCFGRKKLVAAKRVFSSITINPVSDPNTSSNLLVH*

Click here to download the sequence:
Link to NCBI Protein BLAST