Transcript Information: R_Transcript_77019.p1


Annotated TAIR IDAT4G26960.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54970.1); Has 22 Blast hits to 22 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13538923-13539653 | Reverse length=156
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4975733565928
Replicate 27.2921282882951
Replicate 33.4291523347534
Condition 2: 8 Hour
Replicate 13.6655486447972
Replicate 22.6779499211001
Replicate 34.2389988873958
Condition 3: 24 Hour
Replicate 17.0110668779216
Replicate 25.0185619032451
Replicate 33.9319229976462


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77019.p1 GENE.R_Transcript_77019~~R_Transcript_77019.p1 ORF type:5prime_partial len:167 (+),score=13.03 R_Transcript_77019:3-503(+)
TCTTCTCTTTCCCTCTCACTTTCTCTCTCCTCCAAATCTTCCCGCCTCTCTCTCATCTCTTATAAAAACAAAACCCCCCTCCATTTCATTCCACGCTTTCTTACCCACAAAAAATCCCCCCTTCAGTTATTCAGTTTTATTCCTCATAATCTCCTCCCCTACTTTCCAAAAATGAAAAGGAAGATCCGAGTCAACTTCCCCAGGACTCACCGATTCAGCAAGTACATAAAGCCCGGTGACCTGGCCCGCCTTAGGGACTCCAGGTTCCTCGCCGCCAGATCATCCCAACTCGTCGTCTCCACCACCACCACCACTCACCGAGTTGACTCAGAGACCACCCCGAGTCCCCAGACCGACTCACTCCCCGAGTTTCCGAGTTTGGATTTTGGGCCCAGATGTTTTGGTAGAAAGAAGCTTGTTGCTGCTAAAAGGGTTTTCTCTAGTATTACTATAAACCCTGTATCAGACCCTAATACTAATAGTAATCTACTTGTTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77019.p1 GENE.R_Transcript_77019~~R_Transcript_77019.p1 ORF type:5prime_partial len:167 (+),score=13.03 R_Transcript_77019:3-503(+)
SSLSLSLSLSSKSSRLSLISYKNKTPLHFIPRFLTHKKSPLQLFSFIPHNLLPYFPKMKRKIRVNFPRTHRFSKYIKPGDLARLRDSRFLAARSSQLVVSTTTTTHRVDSETTPSPQTDSLPEFPSLDFGPRCFGRKKLVAAKRVFSSITINPVSDPNTNSNLLVH*

Click here to download the sequence:
Link to NCBI Protein BLAST