Transcript Information: R_Transcript_77227.p1


Annotated TAIR IDAT5G55940.1
Annotated Gene NameUncharacterised protein family (UPF0172)
Annotated Gene Symbol(s)emb2731
Annotation TypeHomolog
Chromosome Positionchr5:22656256-22657894 | Reverse length=208
E-Value3E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.251663001965
Replicate 26.7590830107261
Replicate 37.3740867604052
Condition 2: 8 Hour
Replicate 16.5407447461819
Replicate 28.5767765966191
Replicate 39.3244575104728
Condition 3: 24 Hour
Replicate 18.8057342791194
Replicate 210.272312359995
Replicate 310.644020772395


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77227.p1 GENE.R_Transcript_77227~~R_Transcript_77227.p1 ORF type:3prime_partial len:146 (+),score=14.66,UPF0172|PF03665.9|7.3e-20,UPF0172|PF03665.9|2e-08 R_Transcript_77227:63-497(+)
ATGACGGGGGAATTGAAATACGAGATCGCCCAGATTGCTTACATTAAGCTGGTACTCCATTCTTTGAAGCACTCAACTAGCTCTGTCAATGGCGTTTTAGTTGGTACATTCAATCCTAGCAAAGGCGTCGTTGAAATCTCCGATGCTGTCCCTCTTTTCCACTCTCAACACATCGCTTTACTCCCTTCCCTCGAGATCGCCCTTTTGCAGTTGGACAATGGGAGACTGGAAGCTCTACTGAAAGTGAAAGATTGTAGCCCTGTGATGCAGTTGTATACCAGGGACGGATACAAAACCTGGAAATTAGCTGGATCAGAGGAGAGTGCCCGGCTAGCAATGAAGGAGCCATCAGCTAATATAATGTTATTGTACTATATATCATCTCAGAAGTCACAAGACATTGTGGACTTTGACGATCACCTAGATGACGTCAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77227.p1 GENE.R_Transcript_77227~~R_Transcript_77227.p1 ORF type:3prime_partial len:146 (+),score=14.66,UPF0172|PF03665.9|7.3e-20,UPF0172|PF03665.9|2e-08 R_Transcript_77227:63-497(+)
MTGELKYEIAQIAYIKLVLHSLKHSTSSVNGVLVGTFNPSKGVVEISDAVPLFHSQHIALLPSLEIALLQLDNGRLEALLKVKDCSPVMQLYTRDGYKTWKLAGSEESARLAMKEPSANIMLLYYISSQKSQDIVDFDDHLDDVS

Click here to download the sequence:
Link to NCBI Protein BLAST