Transcript Information: R_Transcript_77231.p1


Annotated TAIR IDAT5G55940.1
Annotated Gene NameUncharacterised protein family (UPF0172)
Annotated Gene Symbol(s)emb2731
Annotation TypeOrtholog
Chromosome Positionchr5:22656256-22657894 | Reverse length=208
E-Value5.3E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4485679329501
Replicate 20.2560524441012
Replicate 30.97772660471382
Condition 2: 8 Hour
Replicate 10.29860810911275
Replicate 22.0452026074255
Replicate 31.7708888410134
Condition 3: 24 Hour
Replicate 11.9598128121211
Replicate 20
Replicate 32.8026938928344


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77231.p1 GENE.R_Transcript_77231~~R_Transcript_77231.p1 ORF type:complete len:164 (+),score=25.77,UPF0172|PF03665.9|8.1e-40 R_Transcript_77231:63-554(+)
ATGACGGGGGAATTGAAATACGAGATCGCCCAGATTGCTTACATTAAGCTGGTACTCCATTCTTTGAAGCACTCAACTAGCTCTGTCAATGGCGTTTTAGTTGGTACATTCAATCCTAGCAAAGGCGTCGTTGAAATCTCCGATGCTGTCCCTCTTTTCCACTCTCAACACATCGCTTTACTCCCTTCCCTCGAGATCGCCCTTTTGCAGATAGAAGAGCACTATGGTGGGCAAGGTTTGAGCTTGGTTGGGTACTTCCATGCAAATGCAAGATTTGATGATCACGAGCTCAGTAATGTGGCCAAGAACATTGGTGATCAAATTTATCGATACTTCCCTCAAGCTGCAATTCTTTTGTTGGACAATGGGAGACTGGAAGCTCTACTGAAAGTGAAAGATTGTAGCCCTGTGATGCAGGGACGGATACAAAACCTGGAAATTAGCTGGATCAGAGGAGAGTGCCCGGCTAGCAATGAAGGAGCCATCAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77231.p1 GENE.R_Transcript_77231~~R_Transcript_77231.p1 ORF type:complete len:164 (+),score=25.77,UPF0172|PF03665.9|8.1e-40 R_Transcript_77231:63-554(+)
MTGELKYEIAQIAYIKLVLHSLKHSTSSVNGVLVGTFNPSKGVVEISDAVPLFHSQHIALLPSLEIALLQIEEHYGGQGLSLVGYFHANARFDDHELSNVAKNIGDQIYRYFPQAAILLLDNGRLEALLKVKDCSPVMQGRIQNLEISWIRGECPASNEGAIS*

Click here to download the sequence:
Link to NCBI Protein BLAST