Transcript Information: R_Transcript_77269.p1


Annotated TAIR IDAT1G76660.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi - 22; Plants - 125; Viruses - 4; Other Eukaryotes - 139 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28769157-28771036 | Reverse length=431
E-Value7.9E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.006613400542
Replicate 213.781712608055
Replicate 314.833878531429
Condition 2: 8 Hour
Replicate 115.371082621068
Replicate 219.504205306409
Replicate 320.950317103706
Condition 3: 24 Hour
Replicate 118.103292924049
Replicate 216.274254908245
Replicate 319.573586129692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77269.p1 GENE.R_Transcript_77269~~R_Transcript_77269.p1 ORF type:complete len:454 (+),score=101.25 R_Transcript_77269:335-1696(+)
ATGAGTCAGCGCAAGAAATGGGGAGGATGTTTGGGTGGATTTTCCTGTTTTCGATCACAGAAGGGTGGAAAGCGTATCGTACCAGCATCTCGTACACCAGAAGGCAGCACAGCAGCAAACCAATCTAATGGGCCACAGGGCGTTGGTTTACCAAACCAGGCTACTTCATTAGCCCCTCATCTTCTGGCTCCTCCTTCTTCTCCTGCATCCTTTACGAATTCTGCACTCCCTTCTACTGCTCAATCCCCAAGTTGTATCCTCTCGATGTCTGCCAATTCACCTGGGAATCCTTCCTCAACTATGTTTGCAACTGGACCATATGCTCATGAGACACAACTGGTGACCCCTCCTGTATTTTCAACCTTTACCACTGAGCCTTCAACTGCTCCTTTGACCCCTCCACCAGAGTTGGCTCACCTAACAACCCCCTCTTCTCCTGATGTGCCTTTTGCTCAATTTCTTTCATCCTCAGCAGGTTTAAAATGTGCTGGGAAGACAAATTATGTGGCTTCAAATGATCTGCAAACAACGTATCCTCTTTCACCTGGAAGTCCTGCTAGTAGCCTTATATCACCTGTTTCGAGGACCTCGCGTGACTGTGTTCCTGAGAAGGAGCTCTCTTCTTCATGGGATCCTTCTCTTTCTCCCAAAACTGCTAAATACCCACGAACTGGGTCAGGATGGCTTGCTTCTAATGCCTCCAAGTCTCAAGATGCTAATTTTTTCTGCCCTGCAACTTTTGCTGAATTTTATGTGGACGCACCACATTCTGGTGGAAGGCTAAGTATTTCCAAGGAGCCAGATGTTTACCCTAGTTCTGGAGCTGGAAATCAGTGCAAGCAGAATAAGAATTGCAAGCAAGATGTGGAGGAAATTGAAGCATACAGGGCATCCTTTGGCTTTAGTGCTGATGAAATGATCACCAGTGCTCAATATGTGGAAATATCTGATGTAATGGATGACTCTTTTACTATGATGCCGTGCCCCACTAACAAGCCGCATGTAGAAGAAGCTACATTGCTGGGGTGGGGAGGGGGAGGATCGAGGATAAAAAAGTCAGGGACCAATTCACCTGGTGAAAGATCCACTAAATCAGGGTCATGTAGCAATTGCAAAGTTACACCCAGGATAGTTTCATCCAATCAAACTGAGGATAACTCAGATTGGCAAGCTGGGGATGTCTCTGGACAGAGTACACCAAGAAACTTTTATTTGACCGATGAAGATGACATATTTTCTGACATGGGGAAGTTGAAAACTAACAGAAAATACCACGTAGGCCTTTCCTGCTCTGATGCAGAGATTGAATATAGACGGGGCAGAAGCTTGCGAGAATGTAGAGGAGATCTCTCATGGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77269.p1 GENE.R_Transcript_77269~~R_Transcript_77269.p1 ORF type:complete len:454 (+),score=101.25 R_Transcript_77269:335-1696(+)
MSQRKKWGGCLGGFSCFRSQKGGKRIVPASRTPEGSTAANQSNGPQGVGLPNQATSLAPHLLAPPSSPASFTNSALPSTAQSPSCILSMSANSPGNPSSTMFATGPYAHETQLVTPPVFSTFTTEPSTAPLTPPPELAHLTTPSSPDVPFAQFLSSSAGLKCAGKTNYVASNDLQTTYPLSPGSPASSLISPVSRTSRDCVPEKELSSSWDPSLSPKTAKYPRTGSGWLASNASKSQDANFFCPATFAEFYVDAPHSGGRLSISKEPDVYPSSGAGNQCKQNKNCKQDVEEIEAYRASFGFSADEMITSAQYVEISDVMDDSFTMMPCPTNKPHVEEATLLGWGGGGSRIKKSGTNSPGERSTKSGSCSNCKVTPRIVSSNQTEDNSDWQAGDVSGQSTPRNFYLTDEDDIFSDMGKLKTNRKYHVGLSCSDAEIEYRRGRSLRECRGDLSWH*

Click here to download the sequence:
Link to NCBI Protein BLAST