Transcript Information: R_Transcript_77368.p1


Annotated TAIR IDAT5G43310.1
Annotated Gene NameCOP1-interacting protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17379735-17385387 | Reverse length=1237
E-Value4.1E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.818736736478
Replicate 25.9153663711552
Replicate 36.9854911864428
Condition 2: 8 Hour
Replicate 15.8561395268566
Replicate 26.5767299532899
Replicate 37.9940142747679
Condition 3: 24 Hour
Replicate 18.0316786895683
Replicate 25.5820972579093
Replicate 39.0295252307402


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77368.p1 GENE.R_Transcript_77368~~R_Transcript_77368.p1 ORF type:complete len:1292 (+),score=349.49 R_Transcript_77368:457-4332(+)
ATGAAGTCCAACACTAGGCTTGATTCTATCGTCTTCCAGCTCACTCCCACTAGAACCAGGTGTGATCTAGTGATCACTGCTAATGGGAAAACCGAGAAGATTGCTTCAGGTTTGTTGAACCCTTTCCTAGCCCATTTGAAGGCAGCTCAGGATCTGATTGGGAAGGGAGGATATTCTATTATCCTTGAACCAAAGCAAGGAAGTGAGGCACAATGGTTTACCAAGGGAACCGTAGAAAGGTTTGTTCGTTTTGTGAGTACTCCAGAGATCCTTGAGCGGGTGTACACAATAGAATCTGAAATCTTACAGATTGAAAAGGCAATTTCTGTTCAGAACAGTTGTGAAACGGGGGTGCATACTGTAGAAGATATTCCAGCAAAGTCTGAGGATAACATTGAAGGCAGCAAACCTGCACTGGGTGGTAATGAGGAGAAAGCAATTGTGCTTTACCAGCCTGTCAGCGATCAACAAGAGGATGATGACTCTAACATGCAGGAAAAAAATTCAAAAGTTCAACTTGTACGAGTTCTTGAGACACGTAAAACAGTGCTTCAGAAGGAGCAAGGCATGGCCTTTGCACGTGCTGTTGCTGCTAGCTTTGACGTTGATAACATATCTGCGCTACTCTCTTTTGCTGAATGTTTTGGTGGTTCTCGTATCATGGATGCATGCAAAAGATTTGTGGAACTATGGAAGGCAAAGCATGAAAGTGGTCTGTGGGTTGAAGTTGAAGCAACAGAAGCAATGTCTTGCAGGTCAGACTCGCCAATGAATGCATCAGGCATTATGTTTCTGAGCCCAAATGAACAGGGCGAGGTTGCTTCTGAGAAAGCTGGGGTATCATGTGAAACTGGTGCAGATGTAAAGCCTCGAGCGGATCATCAAGGGCAATTAAACCCACAGGAGTGCAGCCCTGGCCAGTTTCCATACCCTATGTTTGCACCGTGGCAAATGCATCCTCAAGCAAATGGCATGCCACTCTTCCAACCGTATCCCATGCAAGGCATGCCGTACTATCCGAATTATCCAGGGAACAGCCCATTTTTGCAGTCACCATATACTCCGGTTGATGAATCTAGATCACATTCTGGCCAGAGGACAAGACAGAGAAGGCATTCAATGGATAGCAGGGATCTGAGTGCTGATTTTGAAGCTCAAGAGGTTGATATGGATACTGATGAAGAAGATTCTGCAAGTCATAGATCAAGGAAGAAAGGCGGCAGATCTTCCAAAAAGCAGTCTGGAACTGTTGTGATTCGTAATATTAATTACATTGCTGCATCGAAGGAAGGTGGTTCCAATAGTGATGCAGAATCTTGTTCAGGTTCTGGAAGTGATGATGAGGAGGAAAATGTGAGGTTTGATGAAACGAGAAAATCAAAAAAAGTTTATTCAAAATCAAATGATGCACGGAAGTCATCTCGTAAGGAAGAAATAGTGTCTGGACAGGCAGGAGATGATGGACACTGGCAAGCATTTCAGAACTTCTTACTCAAAGATGCCAATGAAAGCCGTAATTCTGCTAAGAGCAATATGTTTGCAATGGAAGGAAAAGTTCAAGGTAGAAAGCGATCAAGTGCCATTGGGGATGCTTCTTCAGTTCTTGGAGGACGTAATATGGGTGAAAATCACGATGTTGGTTTTGGTGAACATCATGACATTAGTGGAGACATGACCTGCATGCGAAAATCAATGGAAGATGGAATGTTGAGTTATGGATGGGAAGCTACCTCAGGCAGTGCAGATGGTCGAATTGATCTGGAACTTGCAGAGGCAGGGGGTCGAAGAGGCTCTTACAGGAGAGGCGCTGATGCAAGCATGAATTACATGATTAATCGGCCAGAAAAGTTGACAGATGTATGGGACTCTTCTTTGGATCCGGTTATTTCTAATGGTTTTCAGGGTTCTTCAAATAACAATAACAAGGGTTCGTCACATGGAGTGTCTGACGAATCTGTTATGATCATGCATAGATCAGGATCATTAGATCATGTTTCAGGTAATGGCAGGACTGCTATGGACATGAATTATGAGCTCCCCTCTCCACTTCAAAAAGAAGAAAGCCATACTGTCGCGACTAAGAGCCTAAGTAATTATGAGCCAAACTTGATGCCTGATCGTGTGATGGAAGATGGGCCAAGTGGCTATGCTCCAGCTCTTGAATATGAGTTGCAGGCTCAAGCTAGAGAAGCTGCTAAGCTAAGCGAGAAGAAGAAAGCAGTTACTACAAATGCCAAAGAAGGGCCAAGGAAGGGGCTCAAAGATCAGAAGCTGAAAGCTCAAAAAGGAATGGCATCAACTATAAAACGAGAGAAGCCTTCTAAATTGAGCCCTTCAGAAGATGCACGCGCTCGTGCTGAAAGGCTACGAGCTTTCAAGGCTGATTTACAAAAGCTAAAGAAAGAAAAGGAAGAGGAACAACTGAAAAGATTAGAAGCATTAAAGATTGAGAGACAAAAGAGAATTGCTGCTAGAAGCGGTGCCAATCCTGCTCAGTCACCTTTATCCACACCACAGGCTAGGAAACAGCTGCCAAAGCTTTCACCTGTTTCTCAGAAAGGTTCGAAGTTCAGTGACACAGAGCCTGGATCATCGTCACCATTACAGAGATCTACCTTAAAAATTGTCCCTAGGGTATCATCTGATTCTAATAAAGCTCCCAAGTCTGGCAGATTAAATGGAGGACATCGGTTAACTAGGTCAGCTTCATCATTGAGCGTGAGGAAGGGAGAAAACAATAATAATACACCAGAAACAAAGGCAACAATGGCGAGAATCAGAAGATTGTCAGAGCCTAAAAGCACTGTTAATCAAATCTCTTCAGCAAAGACACGAAGTTTTGAGGCAGTCTCTAGACAAAGAGTATCCGAGGGACCTGAGATGAAAAGGTTGCCTGTAACAGCAAACCCGGAGAAAGCAAAATCTGCTATTCCTCCAGAATCGAAATTGCGAGCATCTAAAGCATCCTCAGTTTCTTCTCAGAAAAGATCCACATCTAAAGAAACATTGCAGAAGCCAAACGACAAAATGCTATCTCCTGCTAGTGCTAATAGTAGGGGAAATGCCAAAGCTGTATCCCCTAGTGACGGAGATGACAACACTGTAGTTGAAAAGATTGTTTTGGTGCTTGAGTGTGAGAAACCCTCTATACCAATCAAACATGAGTCTGAGGACACGACAAGAGTCCAAACTACTCAGCCTGATGCATACAATCCAAGTGTTAAATCAGACGATGATGTAGCCATTCCTCCACCAGCTTCACCCATCACTGTCAAGGAAATGGACAAAGAATCATCTGAAGGTCAAGTCAAAGGGCAATTTGACACCCACTTGCATGAGACAGAAGCAGACTATACGGAAAAGGTATTACCGGATATCAACAATGACGGCACTACTGAAAAAGCATATCAGGCACCGTATGCTAGAGTCTCATCTCTAGAGGATCCCTGCATGGTTAAGTCGAACTATGGGAAGGCACCTCCAACAAGCTTAGAGATGGCAGCAGCCAGTGTAGAGACCACCACGATTAATGTATCTGATGGTCAGAGGCAAAACATAGTTAAGATATCCGAAGTTGTTTCAGAGAAGCAACAAGGAAAGGAATCATCGAAAGGTTTCCGGCGGCTATTGAAGTTCGGGAAGAGAAGTTCAGCTGCAAGTGGATCTAATGTAGAGTCAGATAAAGCAAGTCTTGATGGCTCTGTGGCTGATGATAGTGCATTGAATAGCTCTTCCAGTGAAGTTTTTACCTTGAAGAACCTTCTCACTCAAGAGGAAAGTTCCAGTGCAGGCACTACTCCAAAGAAGTCTTCTCGATCTTTCTCGATACTGTCACCCTTCAAAAGCAAGAACAGTGGGAAGAAGTTGAGCACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77368.p1 GENE.R_Transcript_77368~~R_Transcript_77368.p1 ORF type:complete len:1292 (+),score=349.49 R_Transcript_77368:457-4332(+)
MKSNTRLDSIVFQLTPTRTRCDLVITANGKTEKIASGLLNPFLAHLKAAQDLIGKGGYSIILEPKQGSEAQWFTKGTVERFVRFVSTPEILERVYTIESEILQIEKAISVQNSCETGVHTVEDIPAKSEDNIEGSKPALGGNEEKAIVLYQPVSDQQEDDDSNMQEKNSKVQLVRVLETRKTVLQKEQGMAFARAVAASFDVDNISALLSFAECFGGSRIMDACKRFVELWKAKHESGLWVEVEATEAMSCRSDSPMNASGIMFLSPNEQGEVASEKAGVSCETGADVKPRADHQGQLNPQECSPGQFPYPMFAPWQMHPQANGMPLFQPYPMQGMPYYPNYPGNSPFLQSPYTPVDESRSHSGQRTRQRRHSMDSRDLSADFEAQEVDMDTDEEDSASHRSRKKGGRSSKKQSGTVVIRNINYIAASKEGGSNSDAESCSGSGSDDEEENVRFDETRKSKKVYSKSNDARKSSRKEEIVSGQAGDDGHWQAFQNFLLKDANESRNSAKSNMFAMEGKVQGRKRSSAIGDASSVLGGRNMGENHDVGFGEHHDISGDMTCMRKSMEDGMLSYGWEATSGSADGRIDLELAEAGGRRGSYRRGADASMNYMINRPEKLTDVWDSSLDPVISNGFQGSSNNNNKGSSHGVSDESVMIMHRSGSLDHVSGNGRTAMDMNYELPSPLQKEESHTVATKSLSNYEPNLMPDRVMEDGPSGYAPALEYELQAQAREAAKLSEKKKAVTTNAKEGPRKGLKDQKLKAQKGMASTIKREKPSKLSPSEDARARAERLRAFKADLQKLKKEKEEEQLKRLEALKIERQKRIAARSGANPAQSPLSTPQARKQLPKLSPVSQKGSKFSDTEPGSSSPLQRSTLKIVPRVSSDSNKAPKSGRLNGGHRLTRSASSLSVRKGENNNNTPETKATMARIRRLSEPKSTVNQISSAKTRSFEAVSRQRVSEGPEMKRLPVTANPEKAKSAIPPESKLRASKASSVSSQKRSTSKETLQKPNDKMLSPASANSRGNAKAVSPSDGDDNTVVEKIVLVLECEKPSIPIKHESEDTTRVQTTQPDAYNPSVKSDDDVAIPPPASPITVKEMDKESSEGQVKGQFDTHLHETEADYTEKVLPDINNDGTTEKAYQAPYARVSSLEDPCMVKSNYGKAPPTSLEMAAASVETTTINVSDGQRQNIVKISEVVSEKQQGKESSKGFRRLLKFGKRSSAASGSNVESDKASLDGSVADDSALNSSSSEVFTLKNLLTQEESSSAGTTPKKSSRSFSILSPFKSKNSGKKLST*

Click here to download the sequence:
Link to NCBI Protein BLAST