Transcript Information: R_Transcript_7744.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value7E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3731052287347
Replicate 28.9671699694606
Replicate 38.1128028986373
Condition 2: 8 Hour
Replicate 16.3765273300118
Replicate 26.9877755753705
Replicate 37.3740918145322
Condition 3: 24 Hour
Replicate 17.6526024092347
Replicate 28.5004643640767
Replicate 37.7518954099428


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7744.p1 GENE.R_Transcript_7744~~R_Transcript_7744.p1 ORF type:complete len:96 (+),score=17.90 R_Transcript_7744:177-464(+)
ATGTGTCTTGATCTGCAACATCACGATGCCAAAGAGGCAGTACATCTTATAAAATGTCATCTTCGTTCGCTCTCTGGCATTGTTGCGATTATGAACCTCAAAATTATCATTGGGAATGGGGAGAAAGATGCTGCAAAACGCAAGCGACTGAATGGAATTCGCACTAAGGTTATAAAGCTACTGGAGAAGGAAGCCATTAAGTGGACTGAAGACGAGAACTTGGGTACTATACTCATAAGGTTGGATGAGATAAATCCAAAGCGCTTTAGTTTTGCTGGGAAATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7744.p1 GENE.R_Transcript_7744~~R_Transcript_7744.p1 ORF type:complete len:96 (+),score=17.90 R_Transcript_7744:177-464(+)
MCLDLQHHDAKEAVHLIKCHLRSLSGIVAIMNLKIIIGNGEKDAAKRKRLNGIRTKVIKLLEKEAIKWTEDENLGTILIRLDEINPKRFSFAGKY*

Click here to download the sequence:
Link to NCBI Protein BLAST