Transcript Information: R_Transcript_77452.p1


Annotated TAIR IDAT4G36960.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17427349-17429589 | Forward length=379
E-Value3.6E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1105.28593399859
Replicate 292.196045403409
Replicate 399.433157051455
Condition 2: 8 Hour
Replicate 187.752415439429
Replicate 2102.62270632701
Replicate 3107.7434987942
Condition 3: 24 Hour
Replicate 1107.86321719832
Replicate 295.552252903032
Replicate 3104.36399972216


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77452.p1 GENE.R_Transcript_77452~~R_Transcript_77452.p1 ORF type:complete len:358 (+),score=83.61,RRM_1|PF00076.18|9.1e-14,RRM_1|PF00076.18|3.3e-12,RRM_1|PF00076.18|2.3e-12,RRM_6|PF14259.2|6.4e-12,RRM_6|PF14259.2|2.5e-09,RRM_6|PF14259.2|1.9e-10,RRM_5|PF13893.2|7.3e-06,RRM_5|PF13893.2|0.0038,RRM_5|PF13893.2|0.2,RRM_7|PF16367.1|0.0092,RRM_7|PF16367.1|0.03,RRM_7|PF16367.1|0.0096,Nup35_RRM_2|PF14605.2|7.5,Nup35_RRM_2|PF14605.2|0.07,Nup35_RRM_2|PF14605.2|0.1 R_Transcript_77452:272-1345(+)
ATGGAGCGAAAGCTCGTGGTTCTTGGTATCCCATGGGATGTAGACACCAATGGTTTGAAGGAATACATGTGTAAATTTGGTGAATTGGAGGACTGTGTTGTAATGAAGGAACGGAATACTGGCAGGTCACGTGGTTTTGGTTATGTCACATTTGTCTCTGATGAGGATGCTAAGAAAGCATTATCGAGTGAGCATCTCCTTGGCAACAGGGTGTTGGAAGTAAAAGTTGCTACACCAAAGGAAGAGATGATGAGGTCATCTACAAAAAAGATCACCCGGATATTTGTGGCCAGGATTGCGCCGTCTGTCACTGAATCTACATTCCGCAGCCATTTCGAGAAGTATGGAGAGATAACTGATCTTTACATGCCTAAAGATCCAGCTACAAAAGGTCATCGTGGCATTGGATTTATTACTTTTGCTAGTGCAGAATCTGTGGACAACCTGATGAAAGACACTCATGAGTTGGGAGGTTCTACTGTAGTAGTTGATCGAGCTACACCCAAGGAAGATGATTATCGCCCATATAATAGAGGATCACATGGTGGTTATGGTGCTTACAATGCTTATATTAGTGCTGCTACAAGATATGCTGCATTAGGTGCTCCTACCTTGTATGATCATCCAGGTTCTTATTATGGAAGGGATCCAATCAGGGGAGTTGGTAGAAAGATATTTGTTGGAAGACTTCCTCAGGAGGCGACTGCAGAAGATCTGCGCATTTATTTTGGCAGATTTGGCCGCATTTTGGATGTTTATATTCCAAAGGATCCTAAGAGATCTGGACATCGTGGTTTTGGCTTTGTAACTTTCGCTGAAGATGGTGTTGCAGACCGAGTGGCTAGACGGTCACATGAGATATTGGGACAACCGGTTGCCATAGACTCTGCTACTCCAGTTGACGAAGCTGGTCCTAGTGGAGGTCTCATGATGGACAATCCTGAGCCTTATGGTAGTTATGGTCCAATTCGTGCATATAGCAGAATGTATGGAAGCCTGGATTTCGATGATTGGGGTTATGGTATGAGCAGTTCAAGGCCTTCCAGATCAGATTGGAGGTACAGGCCATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77452.p1 GENE.R_Transcript_77452~~R_Transcript_77452.p1 ORF type:complete len:358 (+),score=83.61,RRM_1|PF00076.18|9.1e-14,RRM_1|PF00076.18|3.3e-12,RRM_1|PF00076.18|2.3e-12,RRM_6|PF14259.2|6.4e-12,RRM_6|PF14259.2|2.5e-09,RRM_6|PF14259.2|1.9e-10,RRM_5|PF13893.2|7.3e-06,RRM_5|PF13893.2|0.0038,RRM_5|PF13893.2|0.2,RRM_7|PF16367.1|0.0092,RRM_7|PF16367.1|0.03,RRM_7|PF16367.1|0.0096,Nup35_RRM_2|PF14605.2|7.5,Nup35_RRM_2|PF14605.2|0.07,Nup35_RRM_2|PF14605.2|0.1 R_Transcript_77452:272-1345(+)
MERKLVVLGIPWDVDTNGLKEYMCKFGELEDCVVMKERNTGRSRGFGYVTFVSDEDAKKALSSEHLLGNRVLEVKVATPKEEMMRSSTKKITRIFVARIAPSVTESTFRSHFEKYGEITDLYMPKDPATKGHRGIGFITFASAESVDNLMKDTHELGGSTVVVDRATPKEDDYRPYNRGSHGGYGAYNAYISAATRYAALGAPTLYDHPGSYYGRDPIRGVGRKIFVGRLPQEATAEDLRIYFGRFGRILDVYIPKDPKRSGHRGFGFVTFAEDGVADRVARRSHEILGQPVAIDSATPVDEAGPSGGLMMDNPEPYGSYGPIRAYSRMYGSLDFDDWGYGMSSSRPSRSDWRYRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST