Transcript Information: R_Transcript_77458.p1


Annotated TAIR IDAT4G36960.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17427349-17429589 | Forward length=379
E-Value1.1E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.358653721048
Replicate 25.9153663711552
Replicate 39.0775926077632
Condition 2: 8 Hour
Replicate 15.5339570933403
Replicate 28.4459058347512
Replicate 312.58811386677
Condition 3: 24 Hour
Replicate 19.0978307280066
Replicate 26.6916884559646
Replicate 311.926427321653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77458.p1 GENE.R_Transcript_77458~~R_Transcript_77458.p1 ORF type:3prime_partial len:323 (+),score=74.40,RRM_1|PF00076.18|7.6e-14,RRM_1|PF00076.18|2.8e-12,RRM_1|PF00076.18|2e-12,RRM_6|PF14259.2|5.4e-12,RRM_6|PF14259.2|2.1e-09,RRM_6|PF14259.2|1.6e-10,RRM_5|PF13893.2|6.2e-06,RRM_5|PF13893.2|0.0032,RRM_5|PF13893.2|0.17,RRM_7|PF16367.1|0.0078,RRM_7|PF16367.1|0.026,RRM_7|PF16367.1|0.0084,Nup35_RRM_2|PF14605.2|6.4,Nup35_RRM_2|PF14605.2|0.06,Nup35_RRM_2|PF14605.2|0.089 R_Transcript_77458:392-1357(+)
ATGAGGTTTCCTTTTGTGCGTTTTAAGGGTTTTCTTCCGGTTCTGAAATCTTCATTCACTGCCCTCATGGAGCGAAAGCTTGTGGTTCTTGGTATCCCATGGGATGTAGACACCAATGGTTTGAAGGAATACATGTGTAAATTTGGTGAATTGGAGGACTGTGTTGTAATGAAGGAACGGAATACTGGCAGGTCACGTGGTTTTGGTTATGTCACATTTGTCTCTGATGAGGATGCTAAGAAAGCATTATCGAGTGAGCATCTCCTTGGCAACAGGGTGTTGGAAGTAAAAGTTGCTACACCAAAGGAAGAGATGATGAGGTCATCTACAAAAAAGATCACCCGGATATTTGTGGCCAGGATTGCGCCGTCTGTCACTGAATCTACATTCCGCAGCCATTTCGAGAAGTATGGAGAGATAACTGATCTTTACATGCCTAAAGATCCAGCTACAAAAGGTCATCGTGGCATTGGATTTATTACTTTTGCTAGTGCAGAATCTGTGGACAACCTGATGAAAGACACTCATGAGTTGGGAGGTTCTACTGTAGTAGTTGATCGAGCTACACCCAAGGAAGATGATTATCGCCCATATAATAGAGGATCACATGGTGGTTATGGTGCTTACAATGCTTATATTAGTGCTGCTACAAGATATGCTGCATTAGGTGCTCCTACCTTGTATGATCATCCAGGTTCTTATTATGGAAGGGATCCAATCAGGGGAGTTGGTAGAAAGATATTTGTTGGAAGACTTCCTCAGGAGGCGACTGCAGAAGATCTGCGCATTTATTTTGGCAGATTTGGCCGCATTTTGGATGTTTATATTCCAAAGGATCCTAAGAGATCTGGACATCGTGGTTTTGGCTTTGTAACTTTCGCTGAAGATGGTGTTGCAGACCGAGTGGCTAGACGGTCACATGAGATATTGGGACAACCGGTTGCCATAGACTCTGCTACTCCAGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77458.p1 GENE.R_Transcript_77458~~R_Transcript_77458.p1 ORF type:3prime_partial len:323 (+),score=74.40,RRM_1|PF00076.18|7.6e-14,RRM_1|PF00076.18|2.8e-12,RRM_1|PF00076.18|2e-12,RRM_6|PF14259.2|5.4e-12,RRM_6|PF14259.2|2.1e-09,RRM_6|PF14259.2|1.6e-10,RRM_5|PF13893.2|6.2e-06,RRM_5|PF13893.2|0.0032,RRM_5|PF13893.2|0.17,RRM_7|PF16367.1|0.0078,RRM_7|PF16367.1|0.026,RRM_7|PF16367.1|0.0084,Nup35_RRM_2|PF14605.2|6.4,Nup35_RRM_2|PF14605.2|0.06,Nup35_RRM_2|PF14605.2|0.089 R_Transcript_77458:392-1357(+)
MRFPFVRFKGFLPVLKSSFTALMERKLVVLGIPWDVDTNGLKEYMCKFGELEDCVVMKERNTGRSRGFGYVTFVSDEDAKKALSSEHLLGNRVLEVKVATPKEEMMRSSTKKITRIFVARIAPSVTESTFRSHFEKYGEITDLYMPKDPATKGHRGIGFITFASAESVDNLMKDTHELGGSTVVVDRATPKEDDYRPYNRGSHGGYGAYNAYISAATRYAALGAPTLYDHPGSYYGRDPIRGVGRKIFVGRLPQEATAEDLRIYFGRFGRILDVYIPKDPKRSGHRGFGFVTFAEDGVADRVARRSHEILGQPVAIDSATPV

Click here to download the sequence:
Link to NCBI Protein BLAST