Transcript Information: R_Transcript_7748.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value7E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23007933976536
Replicate 20
Replicate 30.57748077973493
Condition 2: 8 Hour
Replicate 10
Replicate 20.187906570094
Replicate 30
Condition 3: 24 Hour
Replicate 11.5433819985011
Replicate 20
Replicate 30.18393029148653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7748.p1 GENE.R_Transcript_7748~~R_Transcript_7748.p1 ORF type:complete len:238 (+),score=49.88 R_Transcript_7748:179-892(+)
ATGGAAGCACCTGCATCAAGTAGAGTGCTTGATGATGAAGACAAGGCCTTGAAGAGCCTGCTTGACACATTTGGTTCTGTGTTCTCTCTTCAAGACATAGCTTCTGCTTTTTGCAAGGCAGGACGAGACGCTAGCCTTGCTGGTGAACTTCTGTGTGGAATGAGAACACACTCACCTTGCGGTACCTTTCGTGTATCTAATGGTTTTGTAAATGGTGAAACTTCTTCGAAGTATGATAATGGATTTGGTATGTCAAGCTACCCAATTGGAAATAGTGACTGTAAAGCAATAAAATTTAAAAGGAATCCTGTTTCAATGGGTACTGTTTCAAATGTGCTTGGGAAAAATTATGTGTGGCGTCCTCGGACAAATATAATTTCCAATATAACAAAGCCATTGGACATAGAAGAAAACAAGTCGTCGGGCTTGCATTCTTCTCAAGAGTCTGTATCAGAAAAGGGCAATGTTGCTAATTCGAACCAGGACATCGAGAATTTTCTCTTTGAAATGCTTGGACAGGGTTTTCAGCTTGAGAGGAGTGCTATTCGTGAAGTCTTAGGTCATTGTGGATATGACATGCAGATGAGCTTGGAGACATTGCTGGATCTTACAGCTGCAACTCTTGACAGCAGGAACGACTTTCATGTGGTAACATTGTCAACCAAGTCAAAGCAGAACTATGAGAACCAATGGGATCTCGGAAACACAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7748.p1 GENE.R_Transcript_7748~~R_Transcript_7748.p1 ORF type:complete len:238 (+),score=49.88 R_Transcript_7748:179-892(+)
MEAPASSRVLDDEDKALKSLLDTFGSVFSLQDIASAFCKAGRDASLAGELLCGMRTHSPCGTFRVSNGFVNGETSSKYDNGFGMSSYPIGNSDCKAIKFKRNPVSMGTVSNVLGKNYVWRPRTNIISNITKPLDIEENKSSGLHSSQESVSEKGNVANSNQDIENFLFEMLGQGFQLERSAIREVLGHCGYDMQMSLETLLDLTAATLDSRNDFHVVTLSTKSKQNYENQWDLGNTK*

Click here to download the sequence:
Link to NCBI Protein BLAST