Transcript Information: R_Transcript_7749.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5078532962594
Replicate 21.8257652535911
Replicate 32.888240827341
Condition 2: 8 Hour
Replicate 12.2356659299659
Replicate 20.97221225396459
Replicate 31.8940811082143
Condition 3: 24 Hour
Replicate 12.6950469354261
Replicate 21.9178485991806
Replicate 31.2371311344768


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7749.p1 GENE.R_Transcript_7749~~R_Transcript_7749.p1 ORF type:complete len:230 (+),score=62.97 R_Transcript_7749:179-868(+)
ATGGAAGCACCTGCATCAAGTAGAGTGCTTGATGATGAAGACAAGGCCTTGAAGAGCCTGCTTGACACATTTGGTTCTGTGTTCTCTCTTCAAGACATAGCTTCTGCTTTTTGCAAGGCAGGACGAGATGCTAGCCTCGCTGGTGAGCTTCTTTGTGGAAAGAGAACACACTCACTTGGTGGCTCCTTTGAGATATCTAATGGTTTTGTAAACGGTGAAACTTCTTTGAAGTATGATAATGGATTTGGTAAGTCAGGCTACCCAAATGGAAATAGTGACTGTAAAGCAGTAAGATTGAAAAGGAATCCTGTTTCAATGGGTACTGTTTCAAATGTGCTTGGGAAAAATTATGTGTGGCATCCTCAGACAAATATAATTGCCAATGTAACAAAGCCATTGGAAATAGAAGAAAACAAGTCCTCGGGGTCGGTGCATTCTTCTCAAGAGTCCATATCAGAAAAGGGCACTGTTGCTAGTTCGAACCAGGACATTGAGAATTTTCTCTTTGAAATGCTTGGACAGGGTTTTCAGCTTGAGAGGAGTGCTATTCGTGAAGTCTTAGGTCATTGTGGATATGACATGCAGATGAGCTTGGAGACATTGCTGGATCTTACAGCTGCAACTCTTGACAGCAGGAACAATTTTCATGGGAACTATGAGAACCATTGGGATCTCGGAAACACAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7749.p1 GENE.R_Transcript_7749~~R_Transcript_7749.p1 ORF type:complete len:230 (+),score=62.97 R_Transcript_7749:179-868(+)
MEAPASSRVLDDEDKALKSLLDTFGSVFSLQDIASAFCKAGRDASLAGELLCGKRTHSLGGSFEISNGFVNGETSLKYDNGFGKSGYPNGNSDCKAVRLKRNPVSMGTVSNVLGKNYVWHPQTNIIANVTKPLEIEENKSSGSVHSSQESISEKGTVASSNQDIENFLFEMLGQGFQLERSAIREVLGHCGYDMQMSLETLLDLTAATLDSRNNFHGNYENHWDLGNTK*

Click here to download the sequence:
Link to NCBI Protein BLAST