Transcript Information: R_Transcript_77497.p1


Annotated TAIR IDAT5G52220.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21207097-21207678 | Reverse length=145
E-Value8E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57040502983496
Replicate 20.87484585067909
Replicate 30
Condition 2: 8 Hour
Replicate 11.2753054660023
Replicate 21.3975551150741
Replicate 31.5126342183656
Condition 3: 24 Hour
Replicate 12.1522944275973
Replicate 20.22974228011018
Replicate 33.1919569335059


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77497.p1 GENE.R_Transcript_77497~~R_Transcript_77497.p1 ORF type:5prime_partial len:96 (+),score=8.37 R_Transcript_77497:2-289(+)
AAGGAAATGGCAGCAATACAAGTAAAATGTAGGTGTGGCGAAGGCAAGTGTCCAGAATGGGCAATAATAGAGGTGCAAGGAGTGGTGGAACCTCGCCCCGAGTTCGAGAACCGTCTTCAAAACCTCCAGATCGGCCGTCTTTGCCGCCCCTCTTCTCAGGTTTTTATTTATTTATTTATTTACTTTCCATTCCATTCTATGATTGATTGGTTTAATGATTTCGATTTGGTGGGGATAATTGTGCCTGCTGGCAATGAGCCAAGACAAGATTTAAGCATCATTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77497.p1 GENE.R_Transcript_77497~~R_Transcript_77497.p1 ORF type:5prime_partial len:96 (+),score=8.37 R_Transcript_77497:2-289(+)
KEMAAIQVKCRCGEGKCPEWAIIEVQGVVEPRPEFENRLQNLQIGRLCRPSSQVFIYLFIYFPFHSMIDWFNDFDLVGIIVPAGNEPRQDLSIIY*

Click here to download the sequence:
Link to NCBI Protein BLAST