Transcript Information: R_Transcript_77503.p2


Annotated TAIR IDAT5G52220.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21207097-21207678 | Reverse length=145
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1537772107441
Replicate 22.2231376911374
Replicate 34.3118564886875
Condition 2: 8 Hour
Replicate 12.0164829956555
Replicate 23.4198995757107
Replicate 33.4167737638376
Condition 3: 24 Hour
Replicate 14.0513777460654
Replicate 26.227367216163
Replicate 35.9225553858663


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77503.p2 GENE.R_Transcript_77503~~R_Transcript_77503.p2 ORF type:complete len:85 (-),score=14.38,Ctf8|PF09696.6|3.8e-10 R_Transcript_77503:752-1006(-)
ATGAAGACTTACAGCTTCACTTGTGTCCTCCAGGAGACGTACACTTTTACCATAGGGTACCATGAATTGACAGGGTCCAAGGTGGCTCTGAAAAAGCCGCTATTGGTGCTCAAGAAAGTGAAGCATTCAGGTGCTGATCAAAATGGAAGATCTCAGTCTTCAACGGCAGAGTTAGATGTGATCGGAGTTATTAGGCAGAAGATTCTGTTCAAGACTCGACCAAAGGCCCTCATAACCAGCAGCAGCAAGAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77503.p2 GENE.R_Transcript_77503~~R_Transcript_77503.p2 ORF type:complete len:85 (-),score=14.38,Ctf8|PF09696.6|3.8e-10 R_Transcript_77503:752-1006(-)
MKTYSFTCVLQETYTFTIGYHELTGSKVALKKPLLVLKKVKHSGADQNGRSQSSTAELDVIGVIRQKILFKTRPKALITSSSKN*

Click here to download the sequence:
Link to NCBI Protein BLAST