Transcript Information: R_Transcript_77512.p1


Annotated TAIR IDAT1G30760.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10918321-10920441 | Forward length=534
E-Value6.4E-236
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.373246098509
Replicate 27.0978643885185
Replicate 311.230382856875
Condition 2: 8 Hour
Replicate 17.1940771349428
Replicate 26.7676297253854
Replicate 36.7144895923201
Condition 3: 24 Hour
Replicate 110.198955069299
Replicate 26.6751314518384
Replicate 38.7938211750897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77512.p1 GENE.R_Transcript_77512~~R_Transcript_77512.p1 ORF type:complete len:565 (+),score=99.66,FAD_binding_4|PF01565.19|2.8e-26,BBE|PF08031.8|1.3e-22 R_Transcript_77512:1735-3429(+)
ATGCCAAAGGGTATTCATTTTCCCCCAAAGACATTCTCCACAATGAAGAACAACTTGATAATGTGTTCAAGCACCTCAAAATTTCTATCAGGTTTGATGATTCTTGCAATATTTGCCTCTTGGGCATCTGCTGATTCCATCCAAGATAATTTCCTCCAATGCCTATATAAAAATGTTAGGCCCCAGGCCACACTTCCCCTATCATATTACATGCCAAACAACTCTTCCTTTTCAATTGTCCTGCAATCTACCGCTCAAAACCTTAGGTATCTGATGCCTTCTGTGCGGAAACCTGAACTAATTGTAATGCCAACGGACGAATCCCACATCCAAGGTTCCGTGATATGTGCAAAAAAAGTTGGTGTTCAGCTTAGTGTTCGTAGTGGGGGTCATGACTATGAAGGGGTTTCCTATGCATCTGAGATGGAGGAACCATTTATCATCCTCGACATGGCCAAGCTGCGAACGGTGACTGTTGATATTGAAGATAATAGTGCATGGGTGGAGGCAGGGGCCACTATCGGTGAACTCTACTATCACATCTCTCGGGAGAGCAAGGTCCATGGCTTCCCTGCTGGCCTCTGCACTAGCTTGGGTGTGGGAGGACACATCACAGGAGGAGCCTATGGCCCTATGATGAGAAAATATGGCCTTGGAGCTGACAATGCTATTGATGTCAAGATGGTCGATGCCAACGGTCAAGTACTAGACCGAAAATCAATGGGAGAAGATTTATTCTGGGCCATTAGAGGAGGTGGAGGGGGTAACTTTGGGATCATCCTTGCATGGAAGATTCAGTTAGTCCCCGTGCCAGAAAAAGTGACAGTTTTTACCGTTGCTAAATCCTTGGAACAAGGCTTAACAAAGATCCTGTATAAATGGCAGAATGTTGCTGACAAGATTGATGAAAATCTGTTCATCAGAGTAATGTTCCAGAACTCCAAGAACCAAAAGGGTGAGAAAACAGTGCTTGGTTTGTTCCAGGCCTTGTACCTCGGACAAGCTGATCAGCTCCTCAAGGTTATGCAACGTGATTTCCCTGAACTGGGGTTGGGGAAAAAAGATGTTTCTGAAGTTAGTTGGATAGAATCAGTCCTTTACATTGCTGGATACCCATCTGGCACGAAACCTGAAGTTCTGCTTGAAGCAAAGCCAATGTTTACAAACTACTTCAAGGCAAAGTCAGACTTTGTTAGGGACCCTATCCCAGAAAGTGGTCTTGAAGGGCTATGGAAAAGGTATATGGAAGATGAGGGTGCCTTCATGATTTGGAACCCATATGGTGGGATGATGAGTAAGATACCCGAGTCTCAGATCCCATTTCCTCACAGAAACGGGACCATGTGCATGATCCAATATGTGGTAACTTGGATGGATGGTAAGGCTAGTGAAAGTAGGCATATGGAATGGATTAGGAAGCTGCACAACTACATGGCCCTTTATGTGTCAAAGCTCCCTAGGGAAGCATATGTTAATTATAGGGACCTCGATTTGGGCATGACCAAAGATGGGAACACTAGCTTCATACAGGCGAGTTCTTGGGGAACCATGTACTACAAGGACAATTACAATAAGCTAGTGAAGATCAAGACAAGGTTTGACCCAAGTAACTTCTTCAGACATGAACAGAGCATCCCACCTCTTCCAGTTATGGAGAGCGGAGGAAATATTCAGTGGGATACATCTGATGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77512.p1 GENE.R_Transcript_77512~~R_Transcript_77512.p1 ORF type:complete len:565 (+),score=99.66,FAD_binding_4|PF01565.19|2.8e-26,BBE|PF08031.8|1.3e-22 R_Transcript_77512:1735-3429(+)
MPKGIHFPPKTFSTMKNNLIMCSSTSKFLSGLMILAIFASWASADSIQDNFLQCLYKNVRPQATLPLSYYMPNNSSFSIVLQSTAQNLRYLMPSVRKPELIVMPTDESHIQGSVICAKKVGVQLSVRSGGHDYEGVSYASEMEEPFIILDMAKLRTVTVDIEDNSAWVEAGATIGELYYHISRESKVHGFPAGLCTSLGVGGHITGGAYGPMMRKYGLGADNAIDVKMVDANGQVLDRKSMGEDLFWAIRGGGGGNFGIILAWKIQLVPVPEKVTVFTVAKSLEQGLTKILYKWQNVADKIDENLFIRVMFQNSKNQKGEKTVLGLFQALYLGQADQLLKVMQRDFPELGLGKKDVSEVSWIESVLYIAGYPSGTKPEVLLEAKPMFTNYFKAKSDFVRDPIPESGLEGLWKRYMEDEGAFMIWNPYGGMMSKIPESQIPFPHRNGTMCMIQYVVTWMDGKASESRHMEWIRKLHNYMALYVSKLPREAYVNYRDLDLGMTKDGNTSFIQASSWGTMYYKDNYNKLVKIKTRFDPSNFFRHEQSIPPLPVMESGGNIQWDTSDD*

Click here to download the sequence:
Link to NCBI Protein BLAST