Transcript Information: R_Transcript_7753.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value3E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.167212965627
Replicate 25.0345352496846
Replicate 35.6174560862499
Condition 2: 8 Hour
Replicate 16.3383029154994
Replicate 26.1538121688276
Replicate 36.0340503969679
Condition 3: 24 Hour
Replicate 17.2564186332798
Replicate 25.3485505211482
Replicate 36.3217893646079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7753.p1 GENE.R_Transcript_7753~~R_Transcript_7753.p1 ORF type:complete len:367 (+),score=83.72 R_Transcript_7753:179-1279(+)
ATGGAAGCACCTGCATCAAGTAGAGTGCTTGATGATGAAGACAAGGCCTTGAAGAGCCTGCTTGACACATTTGGTTCTGTGTTCTCTCTTCAAGACATAGCTTCTGCTTTTTGCAAGGCAGGACGAGACGCTAGCCTTGCTGGTGAACTTCTGTGTGGAATGAGAACACACTCACCTTGCGGTACCTTTCGTGTATCTAATGGTTTTGTAAATGGTGAAACTTCTTCGAAGTATGATAATGGATTTGGTATGTCAAGCTACCCAATTGGAAATAGTGACTGTAAAGCAATAAAATTTAAAAGGAATCCTGTTTCAATGGGTACTGTTTCAAATGTGCTTGGGAAAAATTATGTGTGGCGTCCTCGGACAAATATAATTTCCAATATAACAAAGCCATTGGACATAGAAGAAAACAAGTCGTCGGGCTTGCATTCTTCTCAAGAGTCTGTATCAGAAAAGGGCAATGTTGCTAATTCGAACCAGGACATCGAGAATTTTCTCTTTGAAATGCTTGGACAGGGTTTTCAGCTTGAGAGGAGTGCTATTCGTGAAGTCTTAGGTCATTGTGGATATGACATGCAGATGAGCTTGGAGACATTGCTGGATCTTACAGCTGCAACTCTTGACAGCAGGAACGACTTTCATGTGGTAACATTGTCAACCAAGGCTGGTAAAATGAATTCAAACTCAGAAACTTTCTCATCTCAGAACCAAGTGCAAAAAGAAAAATTTGCTGAGAGTCAAAGCAGAACTATGAGAACCAATGGGATCTCGGAAACACAAAATGAAGAGAAATATGGGCAACAGAAGGAAGTTTTGACAGCACTCTTTCGCGTCCCAGAGAGACCTGAACTAACTATAAGCACCCCTGTTATGAAATCTCTTGGGCGATCCAGAGCGTTTGGGGCAGTTGTGACAGAACCCCTGAAGGACATTGGTGAGGACCACAAGACTAAAGTAACAAGTCCTCACCTTACCAATATGAAAGATGAAGAGGATGAATATGAGATCCTTCGCAAAGCTGTTAGGGAATATCGTGATGCAATGAAGGAATATTACAAAGCTGCTGCAGAAGCATTTGCTATTGGTGATCGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7753.p1 GENE.R_Transcript_7753~~R_Transcript_7753.p1 ORF type:complete len:367 (+),score=83.72 R_Transcript_7753:179-1279(+)
MEAPASSRVLDDEDKALKSLLDTFGSVFSLQDIASAFCKAGRDASLAGELLCGMRTHSPCGTFRVSNGFVNGETSSKYDNGFGMSSYPIGNSDCKAIKFKRNPVSMGTVSNVLGKNYVWRPRTNIISNITKPLDIEENKSSGLHSSQESVSEKGNVANSNQDIENFLFEMLGQGFQLERSAIREVLGHCGYDMQMSLETLLDLTAATLDSRNDFHVVTLSTKAGKMNSNSETFSSQNQVQKEKFAESQSRTMRTNGISETQNEEKYGQQKEVLTALFRVPERPELTISTPVMKSLGRSRAFGAVVTEPLKDIGEDHKTKVTSPHLTNMKDEEDEYEILRKAVREYRDAMKEYYKAAAEAFAIGDRA*

Click here to download the sequence:
Link to NCBI Protein BLAST