Transcript Information: R_Transcript_77545.p1


Annotated TAIR IDAT1G67180.1
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25130099-25132169 | Forward length=453
E-Value3.4E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3304588535735
Replicate 26.0050270967506
Replicate 37.1089875298404
Condition 2: 8 Hour
Replicate 15.4633775744361
Replicate 25.760308303916
Replicate 38.1001102159942
Condition 3: 24 Hour
Replicate 111.548754954302
Replicate 29.5736823581816
Replicate 312.342356801131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77545.p1 GENE.R_Transcript_77545~~R_Transcript_77545.p1 ORF type:complete len:493 (+),score=91.74,PTCB-BRCT|PF12738.3|8e-21,zf-C3HC4|PF00097.21|1.8e-10,zf-C3HC4|PF00097.21|5.7e+03,BRCT|PF00533.22|1.1e-09,zf-RING_2|PF13639.2|4.1e-09,zf-RING_2|PF13639.2|5.2e+03,zf-C3HC4_3|PF13920.2|5e-09,zf-C3HC4_3|PF13920.2|1.6e+04,zf-C3HC4_2|PF13923.2|9.3e-08,zf-C3HC4_2|PF13923.2|1.6e+04 R_Transcript_77545:202-1680(+)
ATGATGGAAGGAATGGAATTCATTGTGGCAACTGTGAGTGGATATCACGGCTCTGAGAGGATGAAGCTCATCAAGCTTATCTCTCTCGCTGGTGCCAATTACGTCGGTAAAATGTCCAGATCTACCACTCATTTGGTTTGCTGGGAGTTTAAAGGGAGGAAATATGAACTAGCTAAAAAGTTTGGAACAACCATTCTCAACCATCGATGGCTTGAAGAATGTGTAAAGGAAGGGAAGCGTATTCCAGAGCATCCATACACTTTGCAAAGTGGGCAAGATGTCGGTTTAATAATCCTTGACCTCCCAGTTCTCACAGAAACATCAAGTGTGCTAGCTGAAAATATGCTTCAATTGAACAAACCAAACATGCGTGATCGCCTGGCAGATGTGATTGATCTAGATTCTGATGAAATAGAGAATGATGGTTGGGATGTTGATTTCTTGCTGGATGAGAATTTGTTTCCAAAACGAGGGAGCAGGGAAACCGCTCAACGAAGATCTAAGAGAAGAGTAGGCATGGAAACCTTCAATGAGAACCAGCGAGGAAAGGCAAATAACAGAAGGTCTTTTCATGAGCCTCAGATACTTGCAGTTCCCAGACTTCAGGGAAGAAGTGATGCAGCTATGAGTACGTTGATAGATTTACCTGAATCTTCACATAGAAGTCAGGAGCTTGTCAGAAAAAATGTGACGAGAAATGTCATTGACTTGGCTTTTGTTGATGTGGAACAAGATAGCAGAACACAAACAAATGCTGATAATCTTACCTGCACATCAAGCCTATCTAATAATTCAAATGATATTAGAGATGAGATTGAAGGAAATATTGGCGGAAGGCCAGAGATTTCTTCTACTGGAAATGGCAGAAGTGACGATGAAGCAGCCAACCATCTGAATGCTACTTGTGCCCTTGGAGACACATGCTCACATGGCGAGACCAGTCCTGATTTTGAGAGTTTGAATAGACAGCAGATAGATGATGATGTAGCTGACCAGTGTATCCAACTGCCTGTGTCATCAGACCGAGCATGTGTTATATGCTTCACAGAATCCAGTTCACAGAGGGGTGTTCTTCCATGTGGACATCGGTTCTGTTTCAAATGCATCCGGGAGTGGGCTGATCGCAAGGCTTCAGAGAGGAAGGAGCCAAAGTGTCCTTTGTGCCAAGAAAGTTTTGCTAGCATAACAATAGTAGAGGATGCAGCCTCTCTGGACCAGAAAATTTACTCACAAACTGTTCCAAATCCATCATCAACACAGGACATATACATCATTCCAGAGGGTGGAGCAGGTCATTCTGAGTTTCAGATTTTTCGCCCTTCTGCATGTTGCATTTGTCAGAGCGAACAACCTATAGAGGGCCTTCTCCACTGTCAGATTTGCCGGATTACCTGCATCCATGATTACTGTATAGATCCTCCTGTATTCCCGTGGATATGCAATACCTGCAGAGATCATAGGCCGTTTTATCATCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77545.p1 GENE.R_Transcript_77545~~R_Transcript_77545.p1 ORF type:complete len:493 (+),score=91.74,PTCB-BRCT|PF12738.3|8e-21,zf-C3HC4|PF00097.21|1.8e-10,zf-C3HC4|PF00097.21|5.7e+03,BRCT|PF00533.22|1.1e-09,zf-RING_2|PF13639.2|4.1e-09,zf-RING_2|PF13639.2|5.2e+03,zf-C3HC4_3|PF13920.2|5e-09,zf-C3HC4_3|PF13920.2|1.6e+04,zf-C3HC4_2|PF13923.2|9.3e-08,zf-C3HC4_2|PF13923.2|1.6e+04 R_Transcript_77545:202-1680(+)
MMEGMEFIVATVSGYHGSERMKLIKLISLAGANYVGKMSRSTTHLVCWEFKGRKYELAKKFGTTILNHRWLEECVKEGKRIPEHPYTLQSGQDVGLIILDLPVLTETSSVLAENMLQLNKPNMRDRLADVIDLDSDEIENDGWDVDFLLDENLFPKRGSRETAQRRSKRRVGMETFNENQRGKANNRRSFHEPQILAVPRLQGRSDAAMSTLIDLPESSHRSQELVRKNVTRNVIDLAFVDVEQDSRTQTNADNLTCTSSLSNNSNDIRDEIEGNIGGRPEISSTGNGRSDDEAANHLNATCALGDTCSHGETSPDFESLNRQQIDDDVADQCIQLPVSSDRACVICFTESSSQRGVLPCGHRFCFKCIREWADRKASERKEPKCPLCQESFASITIVEDAASLDQKIYSQTVPNPSSTQDIYIIPEGGAGHSEFQIFRPSACCICQSEQPIEGLLHCQICRITCIHDYCIDPPVFPWICNTCRDHRPFYHR*

Click here to download the sequence:
Link to NCBI Protein BLAST