Transcript Information: R_Transcript_77749.p1


Annotated TAIR IDAT3G55120.1
Annotated Gene NameChalcone-flavanone isomerase family protein
Annotated Gene Symbol(s)TT5, A11, CFI
Annotation TypeOrtholog
Chromosome Positionchr3:20430248-20431415 | Reverse length=246
E-Value6.2E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1112.19079348319
Replicate 2172.27508416887
Replicate 3147.59989915513
Condition 2: 8 Hour
Replicate 1113.41360877239
Replicate 288.414365438997
Replicate 3108.15018210641
Condition 3: 24 Hour
Replicate 1168.38927226011
Replicate 2245.28400891696
Replicate 3129.49462103461


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77749.p1 GENE.R_Transcript_77749~~R_Transcript_77749.p1 ORF type:complete len:239 (+),score=32.72,Chalcone|PF02431.11|1.5e-96 R_Transcript_77749:270-986(+)
ATGGGTCTGTCACCAATGGCTGTGTCACCTGCCGTGAGCGAAGTGAAGGTTGAAGACTACGTGTTCCCTTCAACGGCAAAGGCTCCGGGATCCGATAAGCCGCTCTTTCTCGGTGGCGCAGGTGTAAGAGGAATAGAGATAGAAGGGAAGTTTATAAAATTCACGGCGATTGGAGAGTATTTGGAAGATACTGCAATCCCGGCTTTGACTGCTAAGTGGAAAGGCAAGACTGCCACTGAACTTGCGGATTCTGTTGAATTTTTCCGGGATGTCATCTCAGGTCCATTCGAGAAGTTCACAAAGGTTACCATGATCTTGCCACTAACAGGGCAACAATATTCCGAAAAAGTGACTGAGAATTGTGTTGCAATCTGGAAAGCCATTGGAATTTACACTGATGAAGAAGCCAAAGCTGTCGACAAGTTCCTCGAGACGTTCAAGTCTGTGAAGTTTCCTCCAGGACACTCTATTCTGTTTACGCACTCGCCCAATGGTTCACTAACGATTGCATTTTCGGAGCACAATTCTGTTCCAGAATGCGGGAATGTGGTGATTGAGAACAAGCACTTGTCACAAGCAATTCTGGAATCTATCATTGGGAAACATGGTGTTTCCCCTGAAGCAAAGCAGTGTTTGGCTGCTAGGATATCAGAAATAATACTAAATACTCCTACTAGCAAGGTAGCAGACGATGCTAAGGTGGAAGTTACAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77749.p1 GENE.R_Transcript_77749~~R_Transcript_77749.p1 ORF type:complete len:239 (+),score=32.72,Chalcone|PF02431.11|1.5e-96 R_Transcript_77749:270-986(+)
MGLSPMAVSPAVSEVKVEDYVFPSTAKAPGSDKPLFLGGAGVRGIEIEGKFIKFTAIGEYLEDTAIPALTAKWKGKTATELADSVEFFRDVISGPFEKFTKVTMILPLTGQQYSEKVTENCVAIWKAIGIYTDEEAKAVDKFLETFKSVKFPPGHSILFTHSPNGSLTIAFSEHNSVPECGNVVIENKHLSQAILESIIGKHGVSPEAKQCLAARISEIILNTPTSKVADDAKVEVTN*

Click here to download the sequence:
Link to NCBI Protein BLAST