Transcript Information: R_Transcript_77829.p1


Annotated TAIR IDAT2G41540.1
Annotated Gene Name6-phosphogluconate dehydrogenase family protein
Annotated Gene Symbol(s)GPDHC1
Annotation TypeOrtholog
Chromosome Positionchr2:17326801-17328654 | Forward length=462
E-Value5.6E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.37628332628
Replicate 214.491036398428
Replicate 315.271158397435
Condition 2: 8 Hour
Replicate 126.578673917095
Replicate 226.708831088083
Replicate 344.603316695395
Condition 3: 24 Hour
Replicate 132.86694624479
Replicate 223.751817266776
Replicate 339.472698196029


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77829.p1 GENE.R_Transcript_77829~~R_Transcript_77829.p1 ORF type:complete len:468 (+),score=99.09,NAD_Gly3P_dh_C|PF07479.10|1.2e-22,NAD_Gly3P_dh_N|PF01210.19|0.075,NAD_Gly3P_dh_N|PF01210.19|7.2e-11 R_Transcript_77829:680-2083(+)
ATGGTTGGAAGCAGTGTAATGAATCATACTAGTTCTTATGCAAATGGGTCAGTTCATAATCATCACAATGGCAATGAAGATAAATTAGATGAGCTAAGGAGTTTATTAGGGAAAGCTGATGGTGATCCTTTGAGAATTGTGGGTGTTGGTGCTGGTGCTTGGGGGAGTGTGTTTGCAGCTTTGTTGCAGGATAGTTATGGTCAGTTTCGCGATAAGGTTCAAATACGGATATGGAGAAGGTCTGGAAGAGCGGTTGACAAAACAACTGCTGAGCATTTGTTTGAAGTGATCAATTCGAGGGAAGATGTGTTGAGGAGATTGATAAGGAGGTGTGCTTATCTCAAGTATGTCGAAGCCAGGCTTGGTGATCGGACGCTTTATGCTGACGAGATATTAAGAGATGGATTTTGCTTGAACATGGTTGATACGCCACTTTGTCCTTTGAAGGTTGTAACCAACTTACAGGAAGCTGTTTGGGATGCTGACATAGTTGTGAATGGGTTGCCTTCAACTGAAACTCGTGAGGTTTTCGAAGAGATCAGCAAGTATTGGAAGGAGAGACTCACAGTTCCGATTATTATCTCTTTGTCAAAGGGTATTGAGGCTGCATTGCATCCTGTTCCCCACATTATCACCCCCACAACGATGATATATCGAGCAACTGAAATTCCCATGGAAAACATTCTTTACCTTGGTGGACCGAACATCGCTTCTGAGATCTACAACAAGGAATATGCAAATGCACGTATATGTGGAGCTGAAAAATGGAGGAAGCATCTGGCAAAGTTTCTAAGGCAGCCCCAATTCATTGTGTGGGACAATAGCGACCTAGTCACTCATGAAGTTATGGGTGGTTTGAAGAACGTATATGCCATTGGAGCTGGAATGGTGGCAGCCCTTACAAATGAAAGTGCTACGAGCAAATCTGTGTATTTTGCTCATTGTACATCGGAGATGATATTTATTACTCATTTGTTGGCCGAAGACCCTGAGAAGCTTTCTGGGCCTTTGCTTGCTGATACATACGTAACATTATTGAAAGGACGTAATGCATGGTATGGACAAATGTTGGCCAAGGGCGGACTTAGCCTTGATATGGGTGATAGCATCAGTGGCAAGGGAATGATACAGGGTGTTTCTGCGGTTGGAGCATTCTACGAACTCTTGAGTCAGTCTTCCCTGAATGTGTCTCGTGGTGGAGGAAGCAAGCCAGTTGCTCCTGTTGAGTTGTGCCCTATTCTGAAGACACTCTACAAGATACTCATAACAAGGGAACAATCCTCAGAAGACATCCTCCAAGCACTGAGGGATGAGAACATGTATGATCCTCGAGATCGGATCGAAATTGCACAAACTCATGCTTTCTACATGCCTTCACTCCTTGGGCAGCCTCTGGATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77829.p1 GENE.R_Transcript_77829~~R_Transcript_77829.p1 ORF type:complete len:468 (+),score=99.09,NAD_Gly3P_dh_C|PF07479.10|1.2e-22,NAD_Gly3P_dh_N|PF01210.19|0.075,NAD_Gly3P_dh_N|PF01210.19|7.2e-11 R_Transcript_77829:680-2083(+)
MVGSSVMNHTSSYANGSVHNHHNGNEDKLDELRSLLGKADGDPLRIVGVGAGAWGSVFAALLQDSYGQFRDKVQIRIWRRSGRAVDKTTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLYADEILRDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERLTVPIIISLSKGIEAALHPVPHIITPTTMIYRATEIPMENILYLGGPNIASEIYNKEYANARICGAEKWRKHLAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEDPEKLSGPLLADTYVTLLKGRNAWYGQMLAKGGLSLDMGDSISGKGMIQGVSAVGAFYELLSQSSLNVSRGGGSKPVAPVELCPILKTLYKILITREQSSEDILQALRDENMYDPRDRIEIAQTHAFYMPSLLGQPLDS*

Click here to download the sequence:
Link to NCBI Protein BLAST