Transcript Information: R_Transcript_77854.p1


Annotated TAIR IDAT3G32940.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:13491089-13493630 | Reverse length=607
E-Value2E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8343396170086
Replicate 26.720966842605
Replicate 37.8017825871659
Condition 2: 8 Hour
Replicate 18.6531353718818
Replicate 28.9901624816034
Replicate 311.643990935741
Condition 3: 24 Hour
Replicate 112.5518357058
Replicate 29.4320825473147
Replicate 310.453410817174


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77854.p1 GENE.R_Transcript_77854~~R_Transcript_77854.p1 ORF type:complete len:781 (+),score=197.13,SF1-HH|PF16275.1|8.8e-06,KH_1|PF00013.25|2.1e-05 R_Transcript_77854:210-2552(+)
ATGAGTGCCAAGTTTGACCAAGCATCGGTGATTGAGACACATCATGTGCGAGATTCTGTTGCAGCATCCTCTTCTGCATCATCACATGGTAGCTCAAAGGTGTCTATGTTCAAGGGAAAGCCAGGTTTTGTTATACCAAAAAACAAGTTCTCTGGCTCCTTAGTTCCCATCTTCAAAGCTGGTAAGAAGTCGGAAAGTAATGATGCCGCCAGCGAAGAAAATAGCAAACAGGTGCAAAGAAAAACAAAATGGGCCCCTGATCTTACACAGGATACTACTGTGAGGAGAGGAAGAGCTTTAGCTTATCAGACTCGAGTGGATCAAATCAGTCAACAGCTGAAATTGGGATCAGTGAGTGGTGACGGTAAAAAATCAAGAATAGCTGGTGATCTTCCTGATAGTGAGCTTTCAACTATGCAGATTGATTATGAGAAGTTACAAGCTTTGGAACTTGAAAGAAGGGAAGCTATAGGGGAAATTCTGAAGTTGAATCCAAGTTACAAGGCCCCGTCTGACTATCAACCAGTGATGAGGGAAGCTATCGTTTCTGTACCTATCAAGGAGCATCCTGGGTACAACTTTCTCAGTCTAATATATGGCCCTGATGGTGAGACCCATAAAAGATTGGAAAAGGATACAGGGACTAAGATACAAGTTTATGGTACAAAATCGGAGACAGAAGAGAAGGTTGAAGTTACAGGATCTGATAGGAGTGAACTTCTAAGCTCTTGCAGTGAGATATATGTACGGATTTTGGGGGACACTTGTGATAAAGTTGATGCTGCAGCTGCTTTGATTGAATTACTACTTAACTCAGTATCGGGAAATTCTGTTGCCTCCAAGGCATCAGCTTCAGTGTCTGAAGATAATCCACAAGTTCTTGGTGAGGGTCAAGGTGTTGCTGCTGCCCCTGCAGTCAGCGCTGTTATTGCAAGCCAGGAACTGGTACGTCCAGTTATAGTACCTGCATCAAATTCTTCACAAGGCCCTCTTCAGCCATATCCAGGTTCATGGTTCCCAACAGGTCAGCCTAACATGCCTTCTGGACTTCCTTCTGCTCCTAGTTCTATGGCTTTCACCTTCAATCACTCAGCTGCGCATCCAGTATTTGGATTATCTTCACCTTCTCGACCTCCTGCTCCATATGGATTTGGCTCATCTCCACAAGGCATCCAAGTTGCACCGTCAAGGTTAAATCCACCAGTTCAAATGATGCAAGGCCCATTTGTGCCTCCTGCTTATCCCTTAGGGCAAACTGGTGCCCCCAGAAATCATTCTGCTTCTACGTCTCCTTCTCCCTTTGTAGGTCAGCAGCCAGCTGCAGCAGGTTCACCCAGGATTCCGGCACAACTAACTGAGCGGCCTTTGACGCCTACAGCGAGCTCTCCTGGATGGGCTCCACCTCGGCCTGCTGGTGTTCCACAATCTCTAGCTTCTGGCAGCATGGTTCCACCAATAGGTGCATCACAAGGGGCTGTGGTATCACAATCTGTTTCTTCTTCATTAGCTCCACCGTCTGCACCATCAATCACTCAAGCGTTTCCTTCTCAAATTGCTCCGACTTCAGCAACATCATTCATGCCTTCACAAAGTCGGTCTTCCTCATCAATGCTTATTAAGGCATTTGGACAACATACACCACTGGTTAATTCATCGTCAAATGCCATACTGAGGCCAGCTCAAACACTTATGCCTCCTCAGTCAGGGATGCCAAGCCATGCTGCTGGGACCTTGAATGCTCCAAGCTTCACCCCCCTTATGCCGATGGTTAGTGCAGCTCCAAGGGCACCTCTTCCGGGTTCCAGTGACTTCACTTTTCAGCCTCGCCGAGCACAAGGACCACCTCAGTCTGTCCCAGGACCTGGTGTGCACTTTATACAAAGACGTCCACCAGTGCAGTTGCCTCCAGCACCCCAAACAGCATCATTTTGTCCAGCTATGCAAAATACAGTTCCTCCTAATGTGGGGCAAAATTTTTCTAGGGCACAGATAGGCAACCAAATGGGACCAAACCCTGGTCAATTTGCACAGCCTGGTCAAAATCCCCAGATGGGCCCTAGAAGCCTTGGTCTAACTCCTCAAATGCCGAACACAGCTGGTCTTTTCCCACCCAGAGGAGGGCATTCAGCTCAATATCAGCAAAGCTACCCTCCACCGCCCTTGGGCCGGCCAGGAGGCCTCTTTGTTGGAAATCAGCATTCCAGCCCATCTGGTAGACCGCAAGTGTATGATCCTTTTGCTCCAACTGCTGTAGCTGCTCAAGGAAGCAATCCCACAACCGTCCGAAAGCAGGAGTCTGATCCTGAATATGAGGATCTGATGGCATCAGTAGGGGTCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77854.p1 GENE.R_Transcript_77854~~R_Transcript_77854.p1 ORF type:complete len:781 (+),score=197.13,SF1-HH|PF16275.1|8.8e-06,KH_1|PF00013.25|2.1e-05 R_Transcript_77854:210-2552(+)
MSAKFDQASVIETHHVRDSVAASSSASSHGSSKVSMFKGKPGFVIPKNKFSGSLVPIFKAGKKSESNDAASEENSKQVQRKTKWAPDLTQDTTVRRGRALAYQTRVDQISQQLKLGSVSGDGKKSRIAGDLPDSELSTMQIDYEKLQALELERREAIGEILKLNPSYKAPSDYQPVMREAIVSVPIKEHPGYNFLSLIYGPDGETHKRLEKDTGTKIQVYGTKSETEEKVEVTGSDRSELLSSCSEIYVRILGDTCDKVDAAAALIELLLNSVSGNSVASKASASVSEDNPQVLGEGQGVAAAPAVSAVIASQELVRPVIVPASNSSQGPLQPYPGSWFPTGQPNMPSGLPSAPSSMAFTFNHSAAHPVFGLSSPSRPPAPYGFGSSPQGIQVAPSRLNPPVQMMQGPFVPPAYPLGQTGAPRNHSASTSPSPFVGQQPAAAGSPRIPAQLTERPLTPTASSPGWAPPRPAGVPQSLASGSMVPPIGASQGAVVSQSVSSSLAPPSAPSITQAFPSQIAPTSATSFMPSQSRSSSSMLIKAFGQHTPLVNSSSNAILRPAQTLMPPQSGMPSHAAGTLNAPSFTPLMPMVSAAPRAPLPGSSDFTFQPRRAQGPPQSVPGPGVHFIQRRPPVQLPPAPQTASFCPAMQNTVPPNVGQNFSRAQIGNQMGPNPGQFAQPGQNPQMGPRSLGLTPQMPNTAGLFPPRGGHSAQYQQSYPPPPLGRPGGLFVGNQHSSPSGRPQVYDPFAPTAVAAQGSNPTTVRKQESDPEYEDLMASVGVK*

Click here to download the sequence:
Link to NCBI Protein BLAST