Transcript Information: R_Transcript_77899.p1


Annotated TAIR IDAT3G19900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3067 (InterPro:IPR021420); Has 276 Blast hits to 276 proteins in 83 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6922852-6924557 | Reverse length=222
E-Value8.4E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.486789060464
Replicate 222.296956194299
Replicate 329.190886848194
Condition 2: 8 Hour
Replicate 118.851949118675
Replicate 220.876752515443
Replicate 322.890305428364
Condition 3: 24 Hour
Replicate 122.449891138596
Replicate 216.199880424052
Replicate 324.69630396088


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77899.p1 GENE.R_Transcript_77899~~R_Transcript_77899.p1 ORF type:5prime_partial len:226 (+),score=35.39,DUF3067|PF11267.4|2.7e-34 R_Transcript_77899:1-678(+)
GGTATGACGAGCATTTCAACAGCTTACTCCAGTCCATGGTCATCTGGGGCTCAACAGTGTTCTTTTACAAGAGGATCCGGTAAATCAAGAGGATTGGGATATTTGAGACCATCAATTCCCTGTAGATCTAACTGCTGCCCTAGCTACGATCTGGTCTACGGTAACCAATGTCGTGGATCCGGTAAACATCAGACTGTATGCTCGAGTCTATTGGATAACAGTGATCCAGGAGAGCCTGAAGATGAGAGCTCAAAGAAGGAATCTTCAAAAAAAGATAGTTATGGGGCAAATAATGACAGTTTTAGGGATAATCTGGAAAGAATTATTGGAGCTGATGACTCTAAGTTCAATGGGGCGGACCTCGCAGCTCTTATAAGGAACAAATATGGAAGGTCTTATGATGTTCAACTGATAAAGAAGGAATTCATGGGAAGAAACCTTCTAGCTATGAATGTTATGTGGAAGTATAGGGAGCAGAGATCATTCCCTTTAACTGAAGAAGAATATATATTGAGGCTTGATGATGTTGCAAACACACTGAAATGTTGGGGAGCTGTCTCACATATCAGAAACAGTCTTGAAAAGTCAAAAGAGCGTCCACGGATTGGGAAGGCTGTAAGCATTTTCATAGACATGGATGATTCCGGAGCTCGATCTAATGAATGGATTTACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77899.p1 GENE.R_Transcript_77899~~R_Transcript_77899.p1 ORF type:5prime_partial len:226 (+),score=35.39,DUF3067|PF11267.4|2.7e-34 R_Transcript_77899:1-678(+)
GMTSISTAYSSPWSSGAQQCSFTRGSGKSRGLGYLRPSIPCRSNCCPSYDLVYGNQCRGSGKHQTVCSSLLDNSDPGEPEDESSKKESSKKDSYGANNDSFRDNLERIIGADDSKFNGADLAALIRNKYGRSYDVQLIKKEFMGRNLLAMNVMWKYREQRSFPLTEEEYILRLDDVANTLKCWGAVSHIRNSLEKSKERPRIGKAVSIFIDMDDSGARSNEWIYK*

Click here to download the sequence:
Link to NCBI Protein BLAST