Transcript Information: R_Transcript_77962.p1


Annotated TAIR IDAT2G36370.1
Annotated Gene Nameubiquitin-protein ligases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15247894-15252800 | Forward length=898
E-Value1.1E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1373378164029
Replicate 23.1727742851295
Replicate 33.1560394021366
Condition 2: 8 Hour
Replicate 13.6456732254787
Replicate 24.0249587314134
Replicate 34.2757127239134
Condition 3: 24 Hour
Replicate 14.8976655419102
Replicate 23.4308180496454
Replicate 33.7938688123955


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_77962.p1 GENE.R_Transcript_77962~~R_Transcript_77962.p1 ORF type:complete len:450 (+),score=53.90,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|1.2e+04,LRR_4|PF12799.3|6.8,LRR_4|PF12799.3|0.38,LRR_4|PF12799.3|3.4e+03 R_Transcript_77962:509-1858(+)
ATGAGAACAAAACATGAGCACCTACTCACTCGTTATCCGTTCTCGCTATTGTATGATTTTTGGTCCCCACTGGCGAAAAAAGAATTCTTTATGAAAAATCTGGTCCGATGGCTCTTTTCAACCTATATCCTTCGGGGTGCTTTAGGTCTCACGGCAGTCTTTCTAGGGCATTCGATAGGAATGATGATCACAGGTATTAGTGAAACATCTCTCCTGGAGATCTTGTCTCAGGGATGCATGCTCAACAGTCTTTGCTTGAGGGATACTTGCCTCGTTGATCAAGCACTCTATGGTTTCTCGGGTTCTTCATTGGAGAAGCTCAATGTTTCTAACACTAAGATTTCCGGAGCAGCATTATCACATATGATTGCTAAGAGTCCTGGCCTGAAGTATTTGGAAGCAAGGGGATGTCGAAACTTAATTCATCATCAAAGCGAGTCCAGCACTGTGCCTCATCATCATTGTGAGGAGCTGTTCAATTTGTTGGGGAGGAAATGCAAGTTAGACTGGCTCGCAATTGGATGGGGATTTTCATTTCCCGCTCTTGTTGCAGTGCAATCTGCTTTAAGGTCTCTGAAAGAAATAAATGTGGGTTTGGGTGGCTCACTAGGTCCAGAAGGGCTGAATATGCTGTGTGATTGGTGTCCTTTACTTGAGTCTATCACCGTTCTATTTCAGGTGATATCTGATACTATCATCGTGAAAATGATGGAAGCACTGAGAAACCTGCAGGCATTGTCTATCTGCTATTGTGTTGGAGATATATCTCCATGGAGTTTGAAGCACAGTGTGCCGAATTTAAGAAGATTGAATCTGGCAAGAGTGACGCCTTGGATGACCAATAATGAGTTAATTGTACTGGTGCAGAACTGTGCAAACTTAGTTGAACTTTCATTGGCGGGCTGCTCACTTCTAGATATAGATTCTCAACAGATCATCTCTTCTGGTTGGCCTGGCTTGATTACACTCCATCTAGAGGACTGTGGAGCAGTGACAGCCAACGGGGTTGATTTTCTGTTTGACTGCAAAGCCATGGAGGACCTCCTGCTTCGCCATAATGGCCCTGGAATCCCAAGAAACTTTATACTTGAGGCTGCTTCAAAACTGCCAATGCTACGAAGTATATCCTTAGATTGGTGTGATGCAAGTGAAGGTGACTATGACCTACCACAATTTGCTGACAGGTACTCCCTGAGCACCGTGAAAATATCAAGATGCAAGCTCCAAAAGTGTACATTAGACTTCCATAATATGGAGGCTCAGAAGAGGCCAGTGCACAAGGAAACTTTAGTTCTCGTTTGGAAAAGTACCAGTCTCCAAAGGGTGGTTGTCAAAGAGAGACTCACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_77962.p1 GENE.R_Transcript_77962~~R_Transcript_77962.p1 ORF type:complete len:450 (+),score=53.90,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|1.2e+04,LRR_4|PF12799.3|6.8,LRR_4|PF12799.3|0.38,LRR_4|PF12799.3|3.4e+03 R_Transcript_77962:509-1858(+)
MRTKHEHLLTRYPFSLLYDFWSPLAKKEFFMKNLVRWLFSTYILRGALGLTAVFLGHSIGMMITGISETSLLEILSQGCMLNSLCLRDTCLVDQALYGFSGSSLEKLNVSNTKISGAALSHMIAKSPGLKYLEARGCRNLIHHQSESSTVPHHHCEELFNLLGRKCKLDWLAIGWGFSFPALVAVQSALRSLKEINVGLGGSLGPEGLNMLCDWCPLLESITVLFQVISDTIIVKMMEALRNLQALSICYCVGDISPWSLKHSVPNLRRLNLARVTPWMTNNELIVLVQNCANLVELSLAGCSLLDIDSQQIISSGWPGLITLHLEDCGAVTANGVDFLFDCKAMEDLLLRHNGPGIPRNFILEAASKLPMLRSISLDWCDASEGDYDLPQFADRYSLSTVKISRCKLQKCTLDFHNMEAQKRPVHKETLVLVWKSTSLQRVVVKERLT*

Click here to download the sequence:
Link to NCBI Protein BLAST