Transcript Information: R_Transcript_78036.p1


Annotated TAIR IDAT5G26360.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9255561-9258891 | Reverse length=555
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1137.96223630048
Replicate 2118.32564992237
Replicate 3128.76300792379
Condition 2: 8 Hour
Replicate 1103.96601544028
Replicate 2109.51613224911
Replicate 3132.07985250346
Condition 3: 24 Hour
Replicate 1178.18061157157
Replicate 2174.73942097687
Replicate 3173.96206220627


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78036.p1 GENE.R_Transcript_78036~~R_Transcript_78036.p1 ORF type:complete len:557 (+),score=153.31,Cpn60_TCP1|PF00118.20|2.6e-164 R_Transcript_78036:174-1844(+)
ATGCACGCTCCAGTCCTTGTTCTCAAGGATTCTACTAAACGTGAATCTGGTAGCAAGGTTCACCATGCTAACATCCGAGCTGCAAAGGCGGTTGCTGACATTATCCGTACAACGCTAGGTCCACGATCAATGTTGAAGATGCTCCTTGATGCTGCCGGAGGGATTGTTGTTACCAACGATGGGAATGCAATTTTGCGTGAGTTAGATCTTGCGCACCCAGCTGCAAAGTCAATGATTGAGCTAAGTAGAACCCAAGATGAAGAAGTAGGAGATGGGACCACCTCCGTTATTGTTCTTGCCGGAGAGATGCTTCATGTTGCTGAAGATTTTATTGACAAGAATTATCACCCTACTGTTATTTGCCGAGCCTACAGCAAAGCTCTGGAAGATGCAGTTGCTGTTCTTGACAAAATTGCAATGTCCATTGATGTCGACGATCGTGCTACCATGTTGGGACTGGTCAAGAGCTGTATTGGCACAAAGTTCACTAGTCAATTTGGAGATCTTATTGCTGAGCTAGCAATTGATGCAACTGCGATGGTTGGTGTGGACTTGGGTCAAGGGCTGCGGGAGGTTGACATTAAGAAGTATATTAAAGTTGAGAAATTGCCTGGAGGCCAATTGGAAGATTCACAGGTGCTTAAAGGTGTAATGTTCAATAAGGATGTAGTTGCTCCTGGAAAGATGAGGCGGAAGATTGTCAACCCACGCATCATTCTCCTTGATTCCCCTCTTGAATACAAGAAGGGTGAGAACCAAACAAATGCTGAGATAGTTAGAGAGGAAGACTGGGAAGTCCTGCTAAAAATGGAAGAGGAGTACATTGAGAATTTGTGTGCACAGATACTGAAGTTCAAGCCAGATTTGGTTATCACGGAAAAGGGGCTTAGTGATCTGGCATGTCATTTTCTAAGCAAGGCTGGTGTTAGTGCCATCAGGAGGGTGAGGAAGACAGACAATAACAGAATTGCCAAGGCATGTGGGGCTGTTATTGTAAATCGGCCTGATGAATTGCAAGAATCTGATGTTGGGACTGGTGCTGGCCTCTTTGAGGTCAAGAAAATTGGTGATGAATTCTTTGCCTTTATTGTTGATTGCAAAGACCCAAAAGCTTGCACTGTATTATTAAGAGGTGCTAGCAAAGATCTCTTGAATGAGGTGGAAAGAAATCTGCAGGATGCAATGTGTGTGGCGAGAAATATAATTAAAAATCCAAAACTTGTTCCCGGAGGAGGTGCCACAGAGCTGACAGTATCAGCAACCTTGAAGCAAAAGAGCTCATCCATTGAAGGCATAGAAAAGTGGCCATATGAAGCAGCTGCATTAGCTTTTGAAGCCATACCACGGACACTAGCACAGAACTGTGGGGTAAATGTGATTAGGACTATGACTGCCTTGCGGGGAAAGCATGCAAGTGGTGAAAATGCTTGGGTCGGTATAGATGGGAACACAGGTGAAATTGCAGATATGAAGGAGAAGAAGATATGGGATTCCTACACTGTAAAGGCTCAGACTTTCAAGACAGCCATTGAAGCTGCCTCAATGCTTCTTAGAATAGATGATATTGTGAGTGGTATCAAGAAAAAGCAGGCCCCTGGATCAACAGCTCCATCAAAACCACAGATTGAGCAAGCAGATGATGCTGACAACGAACAAATGATTCCCGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78036.p1 GENE.R_Transcript_78036~~R_Transcript_78036.p1 ORF type:complete len:557 (+),score=153.31,Cpn60_TCP1|PF00118.20|2.6e-164 R_Transcript_78036:174-1844(+)
MHAPVLVLKDSTKRESGSKVHHANIRAAKAVADIIRTTLGPRSMLKMLLDAAGGIVVTNDGNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEDFIDKNYHPTVICRAYSKALEDAVAVLDKIAMSIDVDDRATMLGLVKSCIGTKFTSQFGDLIAELAIDATAMVGVDLGQGLREVDIKKYIKVEKLPGGQLEDSQVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAEIVREEDWEVLLKMEEEYIENLCAQILKFKPDLVITEKGLSDLACHFLSKAGVSAIRRVRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMCVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAALAFEAIPRTLAQNCGVNVIRTMTALRGKHASGENAWVGIDGNTGEIADMKEKKIWDSYTVKAQTFKTAIEAASMLLRIDDIVSGIKKKQAPGSTAPSKPQIEQADDADNEQMIPE*

Click here to download the sequence:
Link to NCBI Protein BLAST