Transcript Information: R_Transcript_78061.p1


Annotated TAIR IDAT4G01590.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35680.1); Has 1908 Blast hits to 1345 proteins in 175 species: Archae - 3; Bacteria - 106; Metazoa - 494; Fungi - 346; Plants - 115; Viruses - 71; Other Eukaryotes - 773 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:689077-690192 | Reverse length=200
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.557772006958
Replicate 254.14835370519
Replicate 365.322562714387
Condition 2: 8 Hour
Replicate 153.423705339444
Replicate 260.556263742158
Replicate 363.313512642402
Condition 3: 24 Hour
Replicate 176.782331350073
Replicate 263.738642918223
Replicate 367.024550237389


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78061.p1 GENE.R_Transcript_78061~~R_Transcript_78061.p1 ORF type:complete len:209 (+),score=76.72,RNA_pol_3_Rpc31|PF11705.4|1.3e-22 R_Transcript_78061:336-962(+)
ATGGCATTTAGAGGAGGACGAGGTCGAGGAAGAGGAGGGTTTGGTAGAGGAGGTCCCTTCAGATTTGCCAAGCAAGAGTCTGTTCCTCTTTTCCCTGATATAGAGTTGCCTGACAGAAGCAAAATTACTAAAGATGATGACCTATTACGAAATTGTGTTATAGTTCGAAGATTGATTGCAGAAACGCCTTACCGCCTTGAAGACAACCCCTTAGGCAGTAAAGAAGAAAGTGTGGACATCGAGAGATATTCTGATAGGGCCAAGAGGATCAATAGATTTGGTCAGCAGTCTCTTGAAAGATCTGGTTTACTGCTTGAACCTGGATATTTTCCTGTTGAGCTTGTTCGAGGGGAAAGATGCAAGACAGGGAGGAAGGTGGTTTGGAATCCGAAACGAGAGCTGAAAAGGTTGGATCTATTTGAACAGCTTGAAGAGAAGTTTAAAGATGAAGAGCCAAAAAGCAAAAATGAGAAGGAAGATGATGAAGATGAAGAAGATGAAGAGGAAGAGATAGAAGGAGAAGAGGAAGACAGTGATGATGGTGATTATGCGGAGAACTTTGGTTATGATGACGATGAAGATGACTTCAACATGGAGGGCAATGGAGATGATGAAGCCCTTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78061.p1 GENE.R_Transcript_78061~~R_Transcript_78061.p1 ORF type:complete len:209 (+),score=76.72,RNA_pol_3_Rpc31|PF11705.4|1.3e-22 R_Transcript_78061:336-962(+)
MAFRGGRGRGRGGFGRGGPFRFAKQESVPLFPDIELPDRSKITKDDDLLRNCVIVRRLIAETPYRLEDNPLGSKEESVDIERYSDRAKRINRFGQQSLERSGLLLEPGYFPVELVRGERCKTGRKVVWNPKRELKRLDLFEQLEEKFKDEEPKSKNEKEDDEDEEDEEEEIEGEEEDSDDGDYAENFGYDDDEDDFNMEGNGDDEALL*

Click here to download the sequence:
Link to NCBI Protein BLAST