Transcript Information: R_Transcript_78123.p1


Annotated TAIR IDAT5G06210.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1878497-1879515 | Forward length=146
E-Value3.7E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6029205885812
Replicate 23.4689539818232
Replicate 34.7805365418057
Condition 2: 8 Hour
Replicate 13.6196496008971
Replicate 24.861061269823
Replicate 34.5773626781845
Condition 3: 24 Hour
Replicate 13.9926621265572
Replicate 23.068557758689
Replicate 32.6645901357962


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78123.p1 GENE.R_Transcript_78123~~R_Transcript_78123.p1 ORF type:5prime_partial len:115 (+),score=24.77,RRM_1|PF00076.18|1.4e-24,RRM_6|PF14259.2|8.1e-14,RRM_5|PF13893.2|1.1e-11 R_Transcript_78123:2-346(+)
ATCCCTAATTTGATCCTCCCTTCCTCTCTCATTTCTCACAGAGTCATCGCTTCCAAACTCTTTGTTGGAGGACTTTCATTTTATACAACAGAGAAGACACTAGCAGAAGCTTTCTCACAGTATGGGCAAGTTGTAGAAGCTAAAATTATACATGACCGTCTCTCTGACAGATCCAAAGGATTCGGGTTTGTAACTTTTGCTTCAGAAGATGAAGCTGATAAAGCCTTGGCAGAATTGAATGGAAAATCATTACATGGACGTGTTATATATGTCGACCATGCAAAGCCAAAGATTGACTGGGGCAACGAAATGCCAATAGCAAGAGGACCTCCTGACGACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78123.p1 GENE.R_Transcript_78123~~R_Transcript_78123.p1 ORF type:5prime_partial len:115 (+),score=24.77,RRM_1|PF00076.18|1.4e-24,RRM_6|PF14259.2|8.1e-14,RRM_5|PF13893.2|1.1e-11 R_Transcript_78123:2-346(+)
IPNLILPSSLISHRVIASKLFVGGLSFYTTEKTLAEAFSQYGQVVEAKIIHDRLSDRSKGFGFVTFASEDEADKALAELNGKSLHGRVIYVDHAKPKIDWGNEMPIARGPPDDK*

Click here to download the sequence:
Link to NCBI Protein BLAST