Transcript Information: R_Transcript_78124.p1


Annotated TAIR IDAT5G06210.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1878497-1879515 | Forward length=146
E-Value8.5E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4399094214181
Replicate 24.5397406305509
Replicate 33.3018720859319
Condition 2: 8 Hour
Replicate 12.2059337790311
Replicate 22.0144938595663
Replicate 35.396424779034
Condition 3: 24 Hour
Replicate 13.1024063821222
Replicate 24.172616546866
Replicate 31.9718652871079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78124.p1 GENE.R_Transcript_78124~~R_Transcript_78124.p1 ORF type:3prime_partial len:111 (+),score=19.70,RRM_1|PF00076.18|6.3e-22,RRM_6|PF14259.2|4.6e-12,RRM_5|PF13893.2|1.3e-07 R_Transcript_78124:140-469(+)
ATGGCGGCACTCATACGAAGATTCACTAAGAGTAGTTGTTCTTCCACTTCTGTTTCTACCTCCTTCATCAATACTCATACTTTTATCCCTAATTTGATCCTCCCTTCCTCTCTCATTTCTCACAGAGTCATCGCTTCCAAACTCTTTGTTGGAGGACTTTCATTTTATACAACAGAGAAGACACTAGCAGAAGCTTTCTCACAGTATGGGCAAGTTGTAGAAGCTAAAATTATACATGACCGTCTCTCTGACAGATCCAAAGGATTCGGGTTTGTAACTTTTGCTTCAGAAGATGAAGCTGATAAAGCCTTGGCAGAATTGAATGGAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78124.p1 GENE.R_Transcript_78124~~R_Transcript_78124.p1 ORF type:3prime_partial len:111 (+),score=19.70,RRM_1|PF00076.18|6.3e-22,RRM_6|PF14259.2|4.6e-12,RRM_5|PF13893.2|1.3e-07 R_Transcript_78124:140-469(+)
MAALIRRFTKSSCSSTSVSTSFINTHTFIPNLILPSSLISHRVIASKLFVGGLSFYTTEKTLAEAFSQYGQVVEAKIIHDRLSDRSKGFGFVTFASEDEADKALAELNGK

Click here to download the sequence:
Link to NCBI Protein BLAST