Transcript Information: R_Transcript_78133.p1


Annotated TAIR IDAT5G06210.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1878497-1879515 | Forward length=146
E-Value1.5E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0415142667642
Replicate 27.6350183331993
Replicate 36.8880399764654
Condition 2: 8 Hour
Replicate 15.9930438682069
Replicate 29.5385579881981
Replicate 38.1237977601732
Condition 3: 24 Hour
Replicate 110.435366921684
Replicate 27.8658615623737
Replicate 37.6530435968173


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78133.p1 GENE.R_Transcript_78133~~R_Transcript_78133.p1 ORF type:complete len:143 (-),score=24.92,RRM_1|PF00076.18|2.7e-24,RRM_6|PF14259.2|2.1e-13,RRM_5|PF13893.2|4.9e-11 R_Transcript_78133:172-600(-)
ATGGCGGCACTCATACGAAGATTCACTAAGAGTAGTTGTTCTTCTTCTTCTGTTTTTAGCTCCTTCATCAATACTCATACTTTAATCCCTAATTTGATCCTCCCTTGCTCTCTCATTTCTCACAGAGGCATCGCTTCCAAACTCTTTGTCGGAGGACTTTCATTTTATACAACAGAGAAGACACTAGCAGAAGCTTTCTCACAGTATGGGCAAGTTGTAGAAGCTAAAATTATACATGACCGTCTCTCTGACAGATCCAAAGGATTCGGGTTTGTAACTTTTGCTTCAGAAGATGAAGCTGATAAAGCTTTGTCAGAATTGAATGGAAAATCATTACATGGACGTGTTATATATGTCGACCAAGCAAAGCCAAAGATTGATTGGGGCAACGGAAGGCCAATAGCAAGAGGACCTCCTGAAGACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78133.p1 GENE.R_Transcript_78133~~R_Transcript_78133.p1 ORF type:complete len:143 (-),score=24.92,RRM_1|PF00076.18|2.7e-24,RRM_6|PF14259.2|2.1e-13,RRM_5|PF13893.2|4.9e-11 R_Transcript_78133:172-600(-)
MAALIRRFTKSSCSSSSVFSSFINTHTLIPNLILPCSLISHRGIASKLFVGGLSFYTTEKTLAEAFSQYGQVVEAKIIHDRLSDRSKGFGFVTFASEDEADKALSELNGKSLHGRVIYVDQAKPKIDWGNGRPIARGPPEDK*

Click here to download the sequence:
Link to NCBI Protein BLAST