Transcript Information: R_Transcript_78208.p1


Annotated TAIR IDAT3G11760.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3718529-3721123 | Forward length=702
E-Value4E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.689107628821
Replicate 212.469884003588
Replicate 315.319607504026
Condition 2: 8 Hour
Replicate 112.677960531061
Replicate 215.03967941095
Replicate 316.999858677469
Condition 3: 24 Hour
Replicate 118.616800531095
Replicate 215.477865693514
Replicate 321.359955462213


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78208.p1 GENE.R_Transcript_78208~~R_Transcript_78208.p1 ORF type:complete len:788 (+),score=168.75,NT-C2|PF10358.5|4.2e-16 R_Transcript_78208:117-2480(+)
ATGGCTGTGAAGATGATAAAGTGGAGGCCATGGCCTCCTTTACAACAACAATCATCCAAGAAATTTGAGGCCAAAATTGAAGTTCATTCTTTAACAGGGCTTGATCATAATGATGATAAAGGTGGAGTCTTTGAAGATGGGTTGAGTGAACTAAGGGTTGAGGTTAAGTGGAAAGGTTCAAAGGCAAATGGGTTCAAGTCTTTTAGGAAAAAGAGTGTGAAAAATGATTGTACAAGAATTGGGAAATTGGTCCAAAACGGTGTCGTTCAATGGAATGAAGAGTTCAAGACTGTTTGTGGGTTTTATTATCAGGATAACAATAAAGTTGAGAGTGTTTTTCTTCCTTGGGATGTTCAATTTCTGATCTTCCATGGCTCTGGGAAGCATTCAAAGAAGAAGGTTGTGTTGGCATCGCCTGCAGTACTGGACCTCGCTGACTATGCATCTGTGGAAGATCTCAAGGAGTTTGACATCAATGTTCCTCTCTCGATTCTTCGAAATGGTTTCAAGTGCAGCCCCTCACTCTCTATATCTCTCAGCTTAATGGAGCTGAGAACTGCCCAACAAGTTTCCAAAGAAGAAGCTCAGAGACCTGTGATGTTTGCTCCATTATCGCCCTGTTTTGGTGGTGCTTTGCCAATAGAGAAAGACGAGGGCTCTTCTTTTAAGTCAAGTATGAGGAAAGTAAAAAGTTGGACGGATTATGTTTCATCAAGGAGAATGAAGAAGGCAGACCGTGGGGAAGTCAGTAGTGACAGCAAGTTTTCAACTGGAAGTGAGGATTCAGAATATAACTACCCATTCGACACTGACTCTTTTGATGATAGTGATGAACCTGAATCCGAGGAAAGCAAGGAGGATACCGATGTTCAAAACTCGTGCACTTATGGACCTTTGAGGCATGCCAACTTAAGAATCAACTGTGAGGATGAAGATATGGTGTACTATAGCAAGAACAAGCCAGATGTGGATAGCTCTCCATTGCACGGTTTTGGGAGTGAAAAATCCAAGGAGGCGCCTATACAGAGTCCAAAGTTCGGGATTTTATCATGGAGGAAAAGGAAGTTAAGTTTCAGATCCCCTAGAGTTAAAGGAGAGCCATTGTTGAAAAAAGATTATGGCGAAGAAGGTGGTGATGATATTGATTTTGATCGTCGCCAGCTTTCCTCCGATGAATCCACAGTGCAACTTGAAGGGTCTACCAGATTTATATCAGAATTCGGGGACGACAACTTTGCTGTTGGTAGCTGGGAGGAAAAGGAGGTGCTAAGTCGTGATGGGTGTATGAAGCTCCATACCCAAGTATTCTTTGCATCAATCGATCAAAGGAGTGAAAGGGCAGCTGGTGAGAGTGCCTGCACTGCTCTGGTTGCTGTTATTGCTGACTGGCTTCACTCCAGCCAAGGGGAAATCCCGATCAAGTCTGAATTCGATAGTCTCATCAGAGAAGGCTCCCTTCAATGGAGGAATCTATGTGAGAATGAAACCTTCAGGGAGAGGTTCCCTGACAAGCACTTTGATCTCGAGACCGTCCTTGAAGCCAAAATCCGCCCCCTCTCTGTTGTCCCCAAGAGATCCTTCATCGGATTCTTCCATCCAGAAGGACTGGAAGGCGAGGAGAGTTTTGATTTCCTTCATAGTTCAATGTCTTTCGACAATATATGGGATGAGATTTGCCGGGTGGCATCCGAGCAGAATCACAACAGTGAACCCTTGGTGTATATTGTGAGCTGGAATGATCACTTCTTTCTACTCAGGGTTGATTCGGATGCCTACTACATCATCGACACTTTGGGGGAACGGCTCTATGAGGGGTGCAATCAAGCCTTTGCTCTAAAATTTAATCGTGATACAACCATCAAAAGAGTTTTGTCACAAGAAAAAACCACCACTGATCCGCTGAAAGAAAAGCTGGAAACCAGCAAGCCTCCTCAGTCAGAGAAGTCGGGATCTAATTCACCCGATCAAGGATCAGAAACCCTTACCCAGGAAGGGTCGGCAGAAGAGATGGTCATCTCTCAAGGAAAAGAATCCTGCAAGGAGTATATAAAGAGTTTCTTGGCCGCGATTCCCATAAGGGAATTGCAAGCCGACATGAAGAAGGGACTGAGTGCTTCGACCCTTGTTCATCAACGACTGCAGATAGAGTTTAACTACACCTCAGCTGAGTTAGAGTACATAGCTCAAGAGAAGGTAGCCGATGAAGAACTAACGTTAATAACGAATAATTTTCCAGCCCATAATCAGATGGAGGCTGTTTTTCAGGAACCCGAGATCTCAGTTCCAGTAATAGCAGATGAGCTTGCGCCGACGGCAGTAGCGACCGACGCACCAGTGCCAATGCTGGCAGTTGCTGTTGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78208.p1 GENE.R_Transcript_78208~~R_Transcript_78208.p1 ORF type:complete len:788 (+),score=168.75,NT-C2|PF10358.5|4.2e-16 R_Transcript_78208:117-2480(+)
MAVKMIKWRPWPPLQQQSSKKFEAKIEVHSLTGLDHNDDKGGVFEDGLSELRVEVKWKGSKANGFKSFRKKSVKNDCTRIGKLVQNGVVQWNEEFKTVCGFYYQDNNKVESVFLPWDVQFLIFHGSGKHSKKKVVLASPAVLDLADYASVEDLKEFDINVPLSILRNGFKCSPSLSISLSLMELRTAQQVSKEEAQRPVMFAPLSPCFGGALPIEKDEGSSFKSSMRKVKSWTDYVSSRRMKKADRGEVSSDSKFSTGSEDSEYNYPFDTDSFDDSDEPESEESKEDTDVQNSCTYGPLRHANLRINCEDEDMVYYSKNKPDVDSSPLHGFGSEKSKEAPIQSPKFGILSWRKRKLSFRSPRVKGEPLLKKDYGEEGGDDIDFDRRQLSSDESTVQLEGSTRFISEFGDDNFAVGSWEEKEVLSRDGCMKLHTQVFFASIDQRSERAAGESACTALVAVIADWLHSSQGEIPIKSEFDSLIREGSLQWRNLCENETFRERFPDKHFDLETVLEAKIRPLSVVPKRSFIGFFHPEGLEGEESFDFLHSSMSFDNIWDEICRVASEQNHNSEPLVYIVSWNDHFFLLRVDSDAYYIIDTLGERLYEGCNQAFALKFNRDTTIKRVLSQEKTTTDPLKEKLETSKPPQSEKSGSNSPDQGSETLTQEGSAEEMVISQGKESCKEYIKSFLAAIPIRELQADMKKGLSASTLVHQRLQIEFNYTSAELEYIAQEKVADEELTLITNNFPAHNQMEAVFQEPEISVPVIADELAPTAVATDAPVPMLAVAVA*

Click here to download the sequence:
Link to NCBI Protein BLAST