Transcript Information: R_Transcript_78264.p1


Annotated TAIR IDAT5G03940.1
Annotated Gene Namechloroplast signal recognition particle 54 kDa subunit
Annotated Gene Symbol(s)FFC, 54CP, CPSRP54, SRP54CP
Annotation TypeOrtholog
Chromosome Positionchr5:1060265-1063257 | Reverse length=564
E-Value7E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4381211383559
Replicate 21.6675762063486
Replicate 32.5635699114828
Condition 2: 8 Hour
Replicate 10.97236286794115
Replicate 21.2108780780425
Replicate 32.5556419285021
Condition 3: 24 Hour
Replicate 12.7350456264052
Replicate 21.3535718452701
Replicate 32.6075604861647


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78264.p1 GENE.R_Transcript_78264~~R_Transcript_78264.p1 ORF type:complete len:277 (+),score=37.94,SRP54_N|PF02881.15|1.3e-19,SRP54|PF00448.18|4.1e-18 R_Transcript_78264:158-988(+)
ATGGAAGCACTCCATTTTCAACTACCAATAACAACTTCCGGCCAAATGTCTTCATCAAAACATTCATATTCCTCCCTCTCTTCAGCCATAAACCTCCCCACTAAAACACCCAACAATTGTTCTTCCTCCTCATTCACTGGCTCCACCCTCGCCATCGGTTTCTCGTCCTGTAGCTCCTTCACTAGGGAATTATGGAGAGCCGTGAATTCAAAGGCGATTAGCACTGTGAGAAGAGAGATGAGAGGATTAATTAGGGCTGAGATGTTTGGGCAGCTTACTACCGGCCTTGAAGCTGCTTGGTCTAAGCTCAAAGGCCAAGAGGTTCTGACAAACGAGAACATTGCGGAACCCATGCGAGATATACGAAGAGCTCTCTTAGAAGCCGATGTGAGCCTTCCAGTTGTAAGAAGATTTGTTCAATCTGTAACCGACCAGGCTGTCGGAGTTGGAGTTATTAAAGGAGTGAGACCGGATCAGCAATTAGTCAAAATTGTGAATGATGAACTCGTGAAGCTAATGGGGGGAGAGGTTTCTGAGCTTGTATTCTCAAAATCTGGACCGACAATAATATTACTTGCAGGACTTCAAGGTGTTGGAAAGACAACAGTGTCTGCGAAGTTGGCTTTTTATCTTAAGAAGCTGGGGAAGAGTTGCATGCTTGTTGCGGGAGATGTGTACAGACCTGCAGCAATTGACCAACTTGTGATTCTCGGACAACAGCAAGCTTGTGACAGGTGGATGTGCCTGTTTACACGGCAGGTACTGATGTTAAACCTGCAGAGATTGCTAAGCAAGGCATCGCAGAGGCCAAAAAGAAAAATATTGACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78264.p1 GENE.R_Transcript_78264~~R_Transcript_78264.p1 ORF type:complete len:277 (+),score=37.94,SRP54_N|PF02881.15|1.3e-19,SRP54|PF00448.18|4.1e-18 R_Transcript_78264:158-988(+)
MEALHFQLPITTSGQMSSSKHSYSSLSSAINLPTKTPNNCSSSSFTGSTLAIGFSSCSSFTRELWRAVNSKAISTVRREMRGLIRAEMFGQLTTGLEAAWSKLKGQEVLTNENIAEPMRDIRRALLEADVSLPVVRRFVQSVTDQAVGVGVIKGVRPDQQLVKIVNDELVKLMGGEVSELVFSKSGPTIILLAGLQGVGKTTVSAKLAFYLKKLGKSCMLVAGDVYRPAAIDQLVILGQQQACDRWMCLFTRQVLMLNLQRLLSKASQRPKRKILT*

Click here to download the sequence:
Link to NCBI Protein BLAST