Transcript Information: R_Transcript_78343.p1


Annotated TAIR IDAT5G43100.1
Annotated Gene NameEukaryotic aspartyl protease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17299264-17302718 | Forward length=631
E-Value2.3E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4017053887788
Replicate 21.350639208066
Replicate 32.0093629470309
Condition 2: 8 Hour
Replicate 12.2194789864462
Replicate 22.3537770359143
Replicate 33.6090921701354
Condition 3: 24 Hour
Replicate 13.2221483828357
Replicate 21.8701827714232
Replicate 31.9199740953419


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78343.p1 GENE.R_Transcript_78343~~R_Transcript_78343.p1 ORF type:5prime_partial len:342 (+),score=37.18,TAXi_N|PF14543.2|6.6e-29,Asp|PF00026.19|3.9e-18 R_Transcript_78343:1-1026(+)
TGTGTATTTACCACAATTGAAGAAAACCCGGAAAACTTGAAAAGAAGCTACAAGTCAAACCACCTAACTCCCCCTTTTCTTCCCAAAACGTTCGTTAACTTATCACTTTCCCAACCGAAAAACCTCGAAATATCACACCCCTTCCCAAAACCAAATCAAACCACCACCATTTCCTCAGCTCAACTCAATCCACCGGCGTCAATGGCGGTCCGATTCACCGCCATAACCGCCGTCCTTTTTTTCTCTCTCCTCATTCTCAAATCCTTCGCAACCGATCCGTCCTCCTCTATTCTCCAACCTTCTCCTCATGGCCAGCCCCTCGTTTTGCCTCTCACTCTCTCTCCTCCTCGCCACTTCGACGCCAAGCTTCGCCGTCACCTCCAACGCCTCGCTCCTAATGCTCGGATGGGCCTCTACGATGATCTCCTCTCCAACGGGTATTATACCACGAGGCTTTGGATCGGATCACCGCCTCAAGAGTTTGCGCTGATTGTTGATACCGGGAGTACCGTCACTTATGTACCTTGCAATAACTGTGAACAGTGTGGCAATCATCAGGATCCGAAGTTCCAGCCAGATCTTTCTAGCACCTATCAGCCTGTAAAATGCAACCCTGATTGTACTTGCGATATTGAGAATTCTCAGTGTATTTATGAGAGACAGTACGCTGAGATGAGCTCTAGCAGTGGTGTCCTCGGAGAAGATATTATTTCATTTGGCAACCAGAGTGAGCTTAAACCTCAACGTGCAGTTTTTGGTTGTGAAAATACCGAAACTGGTGACCTTTACAGTCAGCATGCTGATGGTATAATGGGTTTGGGTCGGGGTGATCTGAGCATTGTGGATCAACTGGTTGACAAAAGTGTAATTAATGATTCCTTTTCACTATGTTATGGTGGGATGGATGTTGGTGGGGGTGCTATGGTTCTTGGCCAAATCTCTCCTCCCTCTGACATGGTCTTTACCAACTCTGATCCTGGTCGCAGTTTCGGGATGGCAACAGTCCATATTACAATATCGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78343.p1 GENE.R_Transcript_78343~~R_Transcript_78343.p1 ORF type:5prime_partial len:342 (+),score=37.18,TAXi_N|PF14543.2|6.6e-29,Asp|PF00026.19|3.9e-18 R_Transcript_78343:1-1026(+)
CVFTTIEENPENLKRSYKSNHLTPPFLPKTFVNLSLSQPKNLEISHPFPKPNQTTTISSAQLNPPASMAVRFTAITAVLFFSLLILKSFATDPSSSILQPSPHGQPLVLPLTLSPPRHFDAKLRRHLQRLAPNARMGLYDDLLSNGYYTTRLWIGSPPQEFALIVDTGSTVTYVPCNNCEQCGNHQDPKFQPDLSSTYQPVKCNPDCTCDIENSQCIYERQYAEMSSSSGVLGEDIISFGNQSELKPQRAVFGCENTETGDLYSQHADGIMGLGRGDLSIVDQLVDKSVINDSFSLCYGGMDVGGGAMVLGQISPPSDMVFTNSDPGRSFGMATVHITISS*

Click here to download the sequence:
Link to NCBI Protein BLAST