Transcript Information: R_Transcript_78346.p1


Annotated TAIR IDAT5G43100.1
Annotated Gene NameEukaryotic aspartyl protease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17299264-17302718 | Forward length=631
E-Value7.2E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8056692557356
Replicate 21.1739866899436
Replicate 32.1182574551281
Condition 2: 8 Hour
Replicate 11.5797332224029
Replicate 21.6349892098931
Replicate 31.9908218099779
Condition 3: 24 Hour
Replicate 12.0736083947604
Replicate 22.3241025497598
Replicate 32.2593759676797


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78346.p1 GENE.R_Transcript_78346~~R_Transcript_78346.p1 ORF type:3prime_partial len:465 (+),score=72.38,Asp|PF00026.19|3.1e-28,TAXi_N|PF14543.2|5.2e-28,TAXi_C|PF14541.2|2.2e+03,TAXi_C|PF14541.2|4e-22 R_Transcript_78346:156-1547(+)
ATGGCGGTCCGGTTCGCCGCCATAACCTCCGTCCTCTTTTTTTCTCTCCTCATTCTCAAATCCTTCGCAACCGATCCGTCCTCCTCTATTCTCCAACCTTCTCCTCATGGCCAGCCCCTCGTTCTGCCTCTCACTTTCTCTCCTCCTCGCCACCTTGACGCTAAGCTTCGCCGTCACCTCCAACGCCTCGCTCCTAATGCTCGGATGGGCCTCTACGATGATCTCCTCTCCAACGGGTATTATACCACGAGGCTTTGGATCGGATCACCGCCTCAAGAGTTTGCGCTGATTGTTGATACCGGGAGTACCGTCACTTATGTACCTTGCAATAACTGTGAACAGTGTGGCAATCATCAGGATCCAAAGTTCCAACCAGATCTTTCTAGCACATATCAGCCTGCAAAATGCAATCCTGATTGTACTTGTGATATTGAGAATTCTCAGTGTATTTATGAGAGACAGTACGCTGAGATGAGCTCTAGCAGTGGTGTCCTCGGAGAAGATATTATTTCATTTGGCAACCAGAGTGAGCTTAAACCTCAACGTGCAGTTTTTGGTTGTGAAAATACCGAAACTGGTGACCTTTACAGTCAGCATGCTGATGGTATAATGGGTTTGGGTCGGGGTGATCTGAGCATTGTGGATCAACTGGTTGACAAAAGTGTAATTAATGATTCCTTTTCACTATGTTATGGTGGGATGGATGTTGGTGGGGGTGCTATGGTTCTTGGCCAAATCTCTCCTCCCTCTGACATGGTCTTTACCAACTCTGATCCTGGTCGCAGTCCATATTACAATATCGAGCTGAAGGAGCTACATGTTGCTGGGAAGAAGCTGTCTATAAAACCAAGTGTGTTTGATGGAAAGCATGGAACTGTTCTTGACAGTGGCACAACATATGCGTATCTACCAGAAGCAGCCTTTGTAACATTTAAGCATGCTATAATGAGTGAGCTTCGTGACCTTAAACAAATTCGTGGTCCTGATCCAAATTACAATGATATTTGTTTTTCTGGTGCTGCAAGAGGGGTTTCAGAACTCGTGAAAACATTCCCAGCAGTCGACATGGTCTTTGGAAGTGGTCAAAAGTATACACTATCGCCAGAAAACTACTTGTTCAGGCACTCCAAGGTGCCTGGTGCATATTGCCTTGGAGTTTTTCAGAATGGCAAGGATCCAACAACTCTTCTAGGAGGAGAGACTCAGGTTGGCTTGATAACAATAGATATGTCATTGAGTATAAAATACTTGGACTTGAAGCCCCGCGTATCAGAACTTGGTGATCTCATTGCTCAAGAGTTGGGTGTCAATAGTTCGCAGGTTCAATTGCTAAATTTGACTTCGAGTGGTAACGGCTCCCTGATTAGATGGGCCATTCATCCTCAAGGCTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78346.p1 GENE.R_Transcript_78346~~R_Transcript_78346.p1 ORF type:3prime_partial len:465 (+),score=72.38,Asp|PF00026.19|3.1e-28,TAXi_N|PF14543.2|5.2e-28,TAXi_C|PF14541.2|2.2e+03,TAXi_C|PF14541.2|4e-22 R_Transcript_78346:156-1547(+)
MAVRFAAITSVLFFSLLILKSFATDPSSSILQPSPHGQPLVLPLTFSPPRHLDAKLRRHLQRLAPNARMGLYDDLLSNGYYTTRLWIGSPPQEFALIVDTGSTVTYVPCNNCEQCGNHQDPKFQPDLSSTYQPAKCNPDCTCDIENSQCIYERQYAEMSSSSGVLGEDIISFGNQSELKPQRAVFGCENTETGDLYSQHADGIMGLGRGDLSIVDQLVDKSVINDSFSLCYGGMDVGGGAMVLGQISPPSDMVFTNSDPGRSPYYNIELKELHVAGKKLSIKPSVFDGKHGTVLDSGTTYAYLPEAAFVTFKHAIMSELRDLKQIRGPDPNYNDICFSGAARGVSELVKTFPAVDMVFGSGQKYTLSPENYLFRHSKVPGAYCLGVFQNGKDPTTLLGGETQVGLITIDMSLSIKYLDLKPRVSELGDLIAQELGVNSSQVQLLNLTSSGNGSLIRWAIHPQGS

Click here to download the sequence:
Link to NCBI Protein BLAST