Transcript Information: R_Transcript_78359.p1


Annotated TAIR IDAT5G08740.1
Annotated Gene NameNAD(P)H dehydrogenase C1
Annotated Gene Symbol(s)NDC1
Annotation TypeOrtholog
Chromosome Positionchr5:2848752-2851323 | Reverse length=519
E-Value1.5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66731255103273
Replicate 20.45153334228598
Replicate 30.88671242307687
Condition 2: 8 Hour
Replicate 11.3691021260825
Replicate 20.7213187690705
Replicate 31.3272145399853
Condition 3: 24 Hour
Replicate 11.678635367187
Replicate 20.66402929993136
Replicate 30.65898465723992


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78359.p1 GENE.R_Transcript_78359~~R_Transcript_78359.p1 ORF type:complete len:465 (+),score=101.49,Pyr_redox_2|PF07992.10|2.6e-32,NAD_binding_9|PF13454.2|0.024,NAD_binding_9|PF13454.2|1.2e+03,NAD_binding_9|PF13454.2|0.63,NAD_binding_9|PF13454.2|1.6e+03,NAD_binding_8|PF13450.2|0.0035,NAD_binding_8|PF13450.2|2.7,DAO|PF01266.20|0.074,DAO|PF01266.20|1.9e+02,DAO|PF01266.20|1.7 R_Transcript_78359:162-1556(+)
ATGTCGCAATTAGCTTTATCCGCTACTTCCACGCTTCCTCACTTTTCCAGATGCACAAACCCACGCAATCAGGTTTTCCCCTTTATTATGAGACGACATGGACAAAGCTTTTCATCATTTGCAAACTCTCGAAAGAAAGGATTCTCTATCATTGCTTCAGCAACTGCAGGAATGAACAGTGGAGTTGCTGAATCATCTACTAGTGAGGAAGATTTGAAGCAGTATATTTGGCCTGACAAAAAGAAGCCTAGAGTGTGCATTGTAGGTGGTGGGTTTGGAGGATTATATACAGCACTAAGGCTAGAATCTCTTGTATGGCCTGATGACAAGAAGCCTCAAGTACTTCTCATTGATCAGTCTGAACGTTTTGTTTTCAAGCCAATGCTTTATGAGCTTCTATCTGGAGAAGTGGATGCTTGGGAGATAGCTCCCCGATTTCTGGATTTACTAGGAAACACAGGTGTTCAATTTATCCAGGACAGGGTGAAACTTCTTCATCCTTCTAATGTGACGCTAAAGAATGGCTCTCAGAGATGCACATGTGCTGGAACTGTGCAGCTTGAAAGTGATCTTCTTATTGAATATGACTGGTTGGTTCTTGCTTTGGGGGCTGAGCCGAAGCTGGATGTTGTTCCCGGGGCTGTAGAATATGCTTTGCCATTTTCCACTTTTGAGGATGCACGTAAAGTTAATGATAAACTAACAGCACTTGAAAGGAAGTATTTTGGCAAGGGATCCCCAATAAGGGTGGTCATTGTTGGGTGTGGTTACTCTGGGGCGTCATTAGCTGCGACAATAGCAGAGAGACTGCAGGACAAAGGAACTGTGCAAGCAATCGATGTTGAAACCACAGTCTGTCCACTTGCTCTTCCTGGTAATAGGGAAGCTTCCTTAAAAGTGCTTGCGGATAGAAATGTTCAGCTCTTTTTGGGATATGCTGTCAACTCTGTGAGAAGATCTGCTGATGTTGAGCTGTTAAACCAGCTGACTGATAATGTAAGAGTACGGATTGACCAGGAGCATGATCCGGAAACGCTTATTGTGGAAATGCAGTCTGCTGAAAGGGGCCTGCTAACTCAAACTCTGGAAGCAGATTTAGTTTTGTGGACTGTTGGGAGAAACGCTCAACTTGCTCAACTAGAACCCTGTGATAAGCCTCATGTGCTTCCTCTTAATGGCAGAGGAGAGGCAGAGATTGATGAGACTCTTCGGGTAATAGGTCATCCACGGATATTTGCTCTAGGTGATTGCTCTGCAGGGACCCGAAAGGAAAGTCTCTTCCTGCCACTGCACAGGTGGCTTTTGAGCAAGCTGGTTATGCTGGCTGGAATTTATGGGCAGCTATCAATGATCGTCCTCTTCTGCCTTTCAGATTCCAGAATTTGGGTGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78359.p1 GENE.R_Transcript_78359~~R_Transcript_78359.p1 ORF type:complete len:465 (+),score=101.49,Pyr_redox_2|PF07992.10|2.6e-32,NAD_binding_9|PF13454.2|0.024,NAD_binding_9|PF13454.2|1.2e+03,NAD_binding_9|PF13454.2|0.63,NAD_binding_9|PF13454.2|1.6e+03,NAD_binding_8|PF13450.2|0.0035,NAD_binding_8|PF13450.2|2.7,DAO|PF01266.20|0.074,DAO|PF01266.20|1.9e+02,DAO|PF01266.20|1.7 R_Transcript_78359:162-1556(+)
MSQLALSATSTLPHFSRCTNPRNQVFPFIMRRHGQSFSSFANSRKKGFSIIASATAGMNSGVAESSTSEEDLKQYIWPDKKKPRVCIVGGGFGGLYTALRLESLVWPDDKKPQVLLIDQSERFVFKPMLYELLSGEVDAWEIAPRFLDLLGNTGVQFIQDRVKLLHPSNVTLKNGSQRCTCAGTVQLESDLLIEYDWLVLALGAEPKLDVVPGAVEYALPFSTFEDARKVNDKLTALERKYFGKGSPIRVVIVGCGYSGASLAATIAERLQDKGTVQAIDVETTVCPLALPGNREASLKVLADRNVQLFLGYAVNSVRRSADVELLNQLTDNVRVRIDQEHDPETLIVEMQSAERGLLTQTLEADLVLWTVGRNAQLAQLEPCDKPHVLPLNGRGEAEIDETLRVIGHPRIFALGDCSAGTRKESLFLPLHRWLLSKLVMLAGIYGQLSMIVLFCLSDSRIWVR*

Click here to download the sequence:
Link to NCBI Protein BLAST