Transcript Information: R_Transcript_7849.p1


Annotated TAIR IDAT2G26790.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11425270-11427669 | Reverse length=799
E-Value3.1E-205
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1108259677702
Replicate 21.5676552330406
Replicate 31.8504830861029
Condition 2: 8 Hour
Replicate 12.9670754342439
Replicate 23.421187552201
Replicate 35.2433049038082
Condition 3: 24 Hour
Replicate 13.9902186368837
Replicate 22.240619936252
Replicate 34.7418895098909


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7849.p1 GENE.R_Transcript_7849~~R_Transcript_7849.p1 ORF type:complete len:817 (+),score=161.90,PPR_2|PF13041.2|0.6,PPR_2|PF13041.2|4.3e-14,PPR_2|PF13041.2|6e-17,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|6e-17,PPR_2|PF13041.2|4.1e-15,PPR_2|PF13041.2|2.3e-11,PPR_2|PF13041.2|8.2e-05,PPR_2|PF13041.2|17,PPR_2|PF13041.2|4.8e-11,PPR_2|PF13041.2|1.2e-16,PPR_2|PF13041.2|1.1e-19,PPR_2|PF13041.2|2.3e-11,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|1.1e-11,PPR_1|PF12854.3|0.00079,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|38,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|7.2e-06,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|9.6e-10,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|9.4e-11,PPR_1|PF12854.3|3.8e-11,PPR_1|PF12854.3|1.4e+03,PPR|PF01535.16|6.6e+02,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|14,PPR|PF01535.16|0.046,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|0.17,PPR|PF01535.16|0.14,PPR|PF01535.16|0.0016,PPR|PF01535.16|41,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|8.9e-05,PPR|PF01535.16|0.22,PPR|PF01535.16|0.0023,PPR|PF01535.16|2.7,PPR|PF01535.16|0.00061,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|44,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|0.00024,PPR_3|PF13812.2|4.7e+03,PPR_3|PF13812.2|47,PPR_3|PF13812.2|4.9e+02,PPR_3|PF13812.2|2.8e-08,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|3.8e-06,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0048,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|0.00043,MRP-S27|PF10037.5|0.013,MRP-S27|PF10037.5|4.3e+02,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|5.6,MRP-S27|PF10037.5|4.9e+02,MRP-S27|PF10037.5|0.081,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|1e+02,TPR_14|PF13428.2|34,TPR_14|PF13428.2|5.3e+03,TPR_14|PF13428.2|47,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|2.7e+02,TPR_19|PF14559.2|3e+02,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|14,TPR_19|PF14559.2|4.7e+02,TPR_19|PF14559.2|24,TPR_19|PF14559.2|2.7e+03,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|1.6e+04,RPM2|PF08579.7|4.9e+02,RPM2|PF08579.7|0.09,RPM2|PF08579.7|3.6e+03,RPM2|PF08579.7|2.3e+02,RPM2|PF08579.7|36,ATP13|PF12921.3|4.9e+02,ATP13|PF12921.3|2e+02,ATP13|PF12921.3|6.5e+02,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|9.1e+03,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|1.2e+02,ATP13|PF12921.3|0.78 R_Transcript_7849:245-2695(+)
ATGTGGGTTTCTGCCATAAGGTTTTTGTCTCCTAGAAAATTTTGTTGCAACAATCGCTTCATCCGTCAAAGATCGGTTTCTGCACTTGCTGAGTTGAGTTCTATCTTCACTGATTCAAGTTCTGATGAGCAAACAAATTGTTCGAGCCCTAACAGTAGTGAATTGGTGGATACTTTCCTTGAGTTGGACACCAAAAGGGTTGTTGATGTCCTACAGGATTTGAGAAGAGATCCGAATAAGGCTAATTCCTTTTTTCTCCGGCTAAAAGAGTGTGGGTTTCGGCATAATGTTGACACATATGTGTCGATTATTAGAATACTCTGTAGTTGGCGGTCTGATAGGAGGTTGGACTCTTTGTTATTGGATGTTATTAAGTCAGATAAGGATGAATTGGGTTTTGACATGTCCGAGTTGCTTGAAGCTCTTTGTGAAAGACTTGAGGTTGAAGGAACCAGTTCATTGGTTAGAGTCTTTGATGTTTTGGTGAAGGTTTATGTTACTTTGGGCATGTTCGATGAGTCTATCGATACCTTGTTTCAGATACGAAGGCAGGGTTTTGTGCCTAGTATTTTAACATGTAATTTTATAATCAACCGTTTGATAGAGCACGGGAAGCTGGACATGGCTGTGGCTGTCTATCAACAATTAAAGAGGATGGGTTTGAACCCTAATGTATATACATATAATCTTGTCATGAAGGCATTTTGCAGGAAGGGAAGTTTAGAGGAGGCTTTCGATGTATTGAGGGAGATGGAAGAGGCTGGTTTACACCCTAATGAGTATTCTTACACCACATGTCTTGAAGGGCTTTGTTCACATCAAAAGACCACAGAGGCATATGAGGTGCTTAAATTATGGAGGTCTTCTGATGTCCCCTTTGATGATTATGCTTATGATATAGTGATTCGTGGATTTTGCAATGAGATGAAGTTAAGTGAAGCTGAGGGTGTGTTATATGACATTGAGAACCAAGGGTTGTCCCCCAATGTGTATTCTTTTGGTGCTTTAATTCATGCATATTGCAAAACTGGAAATTTTTCAAAAGCAAGGTGTCTTGAAAGTTATATGCCATCAAAAGGCTTGAAAATGAATTGTGTGGTTGTAAGTTCCATTCTTCAGTGCTTGTGTTCTATGGGGTCATTCACAGAGGTTCTTGAGCAATTCAGAACATACAATGACAGTGGCATTTTTCTTGATGAAGTTTGTTATAACATTGTGGTAAATGCTTTGTGTAAGTTAGGCAAGGTGGAAGAAGCTGTGAAACTCCTTGAAGAGATGAAGAAAAGAAACCTGGACCCAGATTTGATCAATTACTCAACTTTGATAAATGGGTATTGTCTCGAGGGAAAACTTATTGACGCCTGGAATGTATTTGAGCAAATGAAAGGTAAGGGTTTGGAGCCTGATATCATTTCATATAATATACTTCTTGGTGGTTTTGCTAGAATGGGTCTTGTAAAAGAGATATTAAACCTTCTTGAGTACATGAGGTCCCAAGGTTTGGCACCTGATGTTCTCACACACAACAAAATCATTGAAGGTCTTTGTGTAGGTGGTAATGTTAAGGAAGCCGAAATGTATCTGAAAAGCTTAGAAGAGAAGTGTCCTGATAACTATTCTGCTATGATTAAGGGATACTGTGAAGCAAGGCTTGCATCAGAGGCCTTCCAACTATTCATCAATCTTTATAAGCAAGGGATTTTAGTGAAGAAGCACACAGGCCTTTTGTTACTAAGCAGCCTATGCATAGAAGGTGAAATTGATAGTGCCTTAATGCTGTTTGAAACATTGCTGGATTCAAAAGATCATCCTTGCATAATAATGTACTCAAAGCTCATGGCGGCTTTGTGTAAGGCTGGAGATATAACTAAGGCACGCTGGGTGTTTGATGACTGGATCAGAAAAGGATCAACACCTGATGCGATCATGTACACAATATTGCTAAACGGGTACTGCAAAGCAAATTCTCTAACGAAGGCCCTTGAACTTTTTAAAGATATGAAGGGTAGAGGCATCATCCCTGATGTTGTCACTTACACGGTTTTGCTTGACGGCCATTCGAAGTTCAGTTTGACAAAGTCCCATTCTTGTTCAGACAATTTTGATAAAAAGGAAGATGCAATGGTTGAAGCAGCTATTAGGAGTGAGATGCTACAAAGAGATGTAAAACCTGATGTTGTCTGTTACACTGCTTTGATTGACAAATATTGTAAGCTGGATGATGTCGAGGATGCCATTAAGCTGTTCCATGAAATGATAGATAATGGTCTACAACCTGATATTGTGACATACACAGCTCTTCTTTCTGGCTTTTGCAGAGTTGGGGACGTGGATAGAGCTGTGACAGTAGTTGATGCCTTGTCGTCACAGGGTCTAGAACCTGACGAGATAACCATGTCAGTGTTGGAACATGGTATATTGAAGGCCAAAAAAGTGTGTTTAAGGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7849.p1 GENE.R_Transcript_7849~~R_Transcript_7849.p1 ORF type:complete len:817 (+),score=161.90,PPR_2|PF13041.2|0.6,PPR_2|PF13041.2|4.3e-14,PPR_2|PF13041.2|6e-17,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|6e-17,PPR_2|PF13041.2|4.1e-15,PPR_2|PF13041.2|2.3e-11,PPR_2|PF13041.2|8.2e-05,PPR_2|PF13041.2|17,PPR_2|PF13041.2|4.8e-11,PPR_2|PF13041.2|1.2e-16,PPR_2|PF13041.2|1.1e-19,PPR_2|PF13041.2|2.3e-11,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|1.1e-11,PPR_1|PF12854.3|0.00079,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|38,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|7.2e-06,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|9.6e-10,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|9.4e-11,PPR_1|PF12854.3|3.8e-11,PPR_1|PF12854.3|1.4e+03,PPR|PF01535.16|6.6e+02,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|14,PPR|PF01535.16|0.046,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|0.17,PPR|PF01535.16|0.14,PPR|PF01535.16|0.0016,PPR|PF01535.16|41,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|8.9e-05,PPR|PF01535.16|0.22,PPR|PF01535.16|0.0023,PPR|PF01535.16|2.7,PPR|PF01535.16|0.00061,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|44,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|0.00024,PPR_3|PF13812.2|4.7e+03,PPR_3|PF13812.2|47,PPR_3|PF13812.2|4.9e+02,PPR_3|PF13812.2|2.8e-08,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|3.8e-06,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0048,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|0.00043,MRP-S27|PF10037.5|0.013,MRP-S27|PF10037.5|4.3e+02,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|5.6,MRP-S27|PF10037.5|4.9e+02,MRP-S27|PF10037.5|0.081,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|1e+02,TPR_14|PF13428.2|34,TPR_14|PF13428.2|5.3e+03,TPR_14|PF13428.2|47,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|2.7e+02,TPR_19|PF14559.2|3e+02,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|14,TPR_19|PF14559.2|4.7e+02,TPR_19|PF14559.2|24,TPR_19|PF14559.2|2.7e+03,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|1.6e+04,RPM2|PF08579.7|4.9e+02,RPM2|PF08579.7|0.09,RPM2|PF08579.7|3.6e+03,RPM2|PF08579.7|2.3e+02,RPM2|PF08579.7|36,ATP13|PF12921.3|4.9e+02,ATP13|PF12921.3|2e+02,ATP13|PF12921.3|6.5e+02,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|9.1e+03,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|1.2e+02,ATP13|PF12921.3|0.78 R_Transcript_7849:245-2695(+)
MWVSAIRFLSPRKFCCNNRFIRQRSVSALAELSSIFTDSSSDEQTNCSSPNSSELVDTFLELDTKRVVDVLQDLRRDPNKANSFFLRLKECGFRHNVDTYVSIIRILCSWRSDRRLDSLLLDVIKSDKDELGFDMSELLEALCERLEVEGTSSLVRVFDVLVKVYVTLGMFDESIDTLFQIRRQGFVPSILTCNFIINRLIEHGKLDMAVAVYQQLKRMGLNPNVYTYNLVMKAFCRKGSLEEAFDVLREMEEAGLHPNEYSYTTCLEGLCSHQKTTEAYEVLKLWRSSDVPFDDYAYDIVIRGFCNEMKLSEAEGVLYDIENQGLSPNVYSFGALIHAYCKTGNFSKARCLESYMPSKGLKMNCVVVSSILQCLCSMGSFTEVLEQFRTYNDSGIFLDEVCYNIVVNALCKLGKVEEAVKLLEEMKKRNLDPDLINYSTLINGYCLEGKLIDAWNVFEQMKGKGLEPDIISYNILLGGFARMGLVKEILNLLEYMRSQGLAPDVLTHNKIIEGLCVGGNVKEAEMYLKSLEEKCPDNYSAMIKGYCEARLASEAFQLFINLYKQGILVKKHTGLLLLSSLCIEGEIDSALMLFETLLDSKDHPCIIMYSKLMAALCKAGDITKARWVFDDWIRKGSTPDAIMYTILLNGYCKANSLTKALELFKDMKGRGIIPDVVTYTVLLDGHSKFSLTKSHSCSDNFDKKEDAMVEAAIRSEMLQRDVKPDVVCYTALIDKYCKLDDVEDAIKLFHEMIDNGLQPDIVTYTALLSGFCRVGDVDRAVTVVDALSSQGLEPDEITMSVLEHGILKAKKVCLRT*

Click here to download the sequence:
Link to NCBI Protein BLAST