Transcript Information: R_Transcript_78496.p1


Annotated TAIR IDAT5G06480.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1976219-1977231 | Reverse length=153
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1560.0655361296
Replicate 2452.084898837
Replicate 3506.41287609722
Condition 2: 8 Hour
Replicate 1408.51101266417
Replicate 2446.93458768648
Replicate 3433.22609904734
Condition 3: 24 Hour
Replicate 1432.8563780464
Replicate 2423.3772165514
Replicate 3426.8102413945


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78496.p1 GENE.R_Transcript_78496~~R_Transcript_78496.p1 ORF type:complete len:158 (+),score=22.67,E1_DerP2_DerF2|PF02221.11|1.9e-21 R_Transcript_78496:179-652(+)
ATGGCGGTTACATCTTCTTGCAAGTTGAAAAACACCCTTTTGTTGTTATTGGTTTGTTTGGCTGTTGTTCCTTCAATTCTAGCCAAGCCCGTCAGATACTGCGATAGGAGAGCTAATTATGGTATCAAGGTCAAGAAAGTTGAAATATCACCTGATCCAGTAAAGCCTGGCGAAAATGCCGTCTTTAAAATCTTTGCATCCACTGGGAAAGGTCTCTCTAAAGGGAATGTGGAGATTGATGTTTCATACTTTGGGATCCCTGTCCACCGTGAGACCATTGACCTCTGTACCGAAACCTCCTGTCCGATTGCTGCAGGCGACTTTGTGCTCTCTCACAGTCAAACTTTGCCATCATACACTCCTCCAGGCTCATACACTCTTAAGATGAGGATCGAGGACAGCAACAAACAGCTGCTGACTTGCATTTCCTTTGGTTTCAAGATCAGCTTGGGATCATCTGTTGCCGATATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78496.p1 GENE.R_Transcript_78496~~R_Transcript_78496.p1 ORF type:complete len:158 (+),score=22.67,E1_DerP2_DerF2|PF02221.11|1.9e-21 R_Transcript_78496:179-652(+)
MAVTSSCKLKNTLLLLLVCLAVVPSILAKPVRYCDRRANYGIKVKKVEISPDPVKPGENAVFKIFASTGKGLSKGNVEIDVSYFGIPVHRETIDLCTETSCPIAAGDFVLSHSQTLPSYTPPGSYTLKMRIEDSNKQLLTCISFGFKISLGSSVADI*

Click here to download the sequence:
Link to NCBI Protein BLAST