Transcript Information: R_Transcript_78545.p1


Annotated TAIR IDAT5G59613.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24016162-24016500 | Reverse length=55
E-Value2.4E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11236.7395100208
Replicate 21398.1203154986
Replicate 31517.6986253984
Condition 2: 8 Hour
Replicate 11310.8099701759
Replicate 21422.8974478274
Replicate 31435.1873463853
Condition 3: 24 Hour
Replicate 11419.0475734191
Replicate 21559.3068035638
Replicate 31392.0580180867


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78545.p1 GENE.R_Transcript_78545~~R_Transcript_78545.p1 ORF type:5prime_partial len:90 (+),score=19.67 R_Transcript_78545:1-270(+)
AGTAAAGTAAACCCGACCCAACTCAAAGGAGAGAAGAGAGAGAAATGGGGTGGAAGAAGTTCGATCCATGGCCGGTATTCTTCAGGAGAGAATTCCATCGCAACTGGCCTTTCCTTGTTGGTTTCGCCATCACTGGCACCCTCATCACCAAGTTCTCTCTTGCTCTCACTGAGGAGGATGCCAAGAACTCGCCATTCGTTCAGAGGCACAGAAGGCACTGAAGATGCATATGCTGGATTTTGGCTTGTTGGGAGCTCTACTTTGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78545.p1 GENE.R_Transcript_78545~~R_Transcript_78545.p1 ORF type:5prime_partial len:90 (+),score=19.67 R_Transcript_78545:1-270(+)
SKVNPTQLKGEKREKWGGRSSIHGRYSSGENSIATGLSLLVSPSLAPSSPSSLLLSLRRMPRTRHSFRGTEGTEDAYAGFWLVGSSTLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST