Transcript Information: R_Transcript_78550.p1


Annotated TAIR IDAT5G65120.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26013274-26014504 | Forward length=317
E-Value1.9E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.892826166298
Replicate 27.1590439078472
Replicate 37.5190054704928
Condition 2: 8 Hour
Replicate 17.4142949840259
Replicate 28.3639939711305
Replicate 310.253581571822
Condition 3: 24 Hour
Replicate 113.319033200805
Replicate 29.9894047901342
Replicate 314.424721409431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78550.p1 GENE.R_Transcript_78550~~R_Transcript_78550.p1 ORF type:complete len:393 (+),score=113.60 R_Transcript_78550:1571-2749(+)
ATGATTTGCACAAGAGTAGTAATGAGTGAAGATAAATCTGAGAAGTTGAAAAAGGATGAGAAAAGACCTGTGTTGGGTGATATAACCAACCAGCAGCTTGGTAAAAGACCTTTTTCTTTGATATCATCGTCATCATCTGGTGGCGGTGGTAATGGTGGTGGTGGTCCTACTAGCTCAGCCTCGTCTTCTGGGAATGACAAGAAGAATAAAGCAACTGCTTCCGATACTAGTTTCGAAGAAAAGGACGCTCTCTTTTGGAAGCAGGTTGCTTTGATTGTTGAAAATTTAGAAAAGGAAAGATCTAACAAACCCAAATGCCCTAAGCTTTCCAATGAACCTGCTGGCTTGTCTCCTTTGAAGGGAGGAAAGATTTATCGCTTGCAGGGTCCAAATGCCGGCCCTGAGACTAAGGAGCCTTCCACTTCTGCTTTGGATAATATTGTTATTGGGGATGGTGATGGTGAAGGCGAAGGCAAAGGTGAAGCCCAGGGGGAAGATGAAGCTTTGCAAAATGTAGCCACTGCCTCTGATGCCATAGCAGCTGGTGAGAGCTCTAAATCGGGGGAAGGAAAATATGTTGAAGCTGGAAAGATGGATGGTGATGAAGAAACAAGAGTTCTATATGAAGTGGCAGAAATTGAGTGCACACAGCCACAACCAACATTAGCTGCCAAAGTTGGGAGCTCGAGATTGGTGGATTCGCATCAGGATAAGGGATCGTTTGGGCTAGAGAGATGCGGTGGGCTCAAAGGCAATAGTTGCAGTAATATGTCTGCTAGCTTGGACTCGCTTAAGTCATGCTCTTGCTCATTTTGTACTACAGCTGCATATATATGGTCTGATCTGCATTACCAGGATGTCAAAGGCCGAATATCAGTATTGATGAAGAGTCAGAAAGAAGCAAGTGATTTAGCTCAAATGTACTCAGAGGAAAATGAAATGGGTGGACATAGCCAAGGGAACTCCAGTAAGGCTATACATGTAGAGGCTGACCTCTCTACTCAATGGAAGTCTCTCTTCAGTCACATGGAAAGTATATTTGCCAGTGAAAGCAGCCAATTACAAGAAAAGTTTGCTGCTCTGAAGGAATTAAGAGATGAGTTCAAGACCAATTTAGATGGAAGCCCTACAGATGTCCACCCATGTTCTTCTGATGCTTCTGATCATAGAATTATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78550.p1 GENE.R_Transcript_78550~~R_Transcript_78550.p1 ORF type:complete len:393 (+),score=113.60 R_Transcript_78550:1571-2749(+)
MICTRVVMSEDKSEKLKKDEKRPVLGDITNQQLGKRPFSLISSSSSGGGGNGGGGPTSSASSSGNDKKNKATASDTSFEEKDALFWKQVALIVENLEKERSNKPKCPKLSNEPAGLSPLKGGKIYRLQGPNAGPETKEPSTSALDNIVIGDGDGEGEGKGEAQGEDEALQNVATASDAIAAGESSKSGEGKYVEAGKMDGDEETRVLYEVAEIECTQPQPTLAAKVGSSRLVDSHQDKGSFGLERCGGLKGNSCSNMSASLDSLKSCSCSFCTTAAYIWSDLHYQDVKGRISVLMKSQKEASDLAQMYSEENEMGGHSQGNSSKAIHVEADLSTQWKSLFSHMESIFASESSQLQEKFAALKELRDEFKTNLDGSPTDVHPCSSDASDHRII*

Click here to download the sequence:
Link to NCBI Protein BLAST