Transcript Information: R_Transcript_7857.p1


Annotated TAIR IDAT5G08580.1
Annotated Gene NameCalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2780976-2782961 | Reverse length=391
E-Value2.6E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.209911518505
Replicate 213.815961830536
Replicate 318.20653436298
Condition 2: 8 Hour
Replicate 116.747407629012
Replicate 216.08506830557
Replicate 318.280041827607
Condition 3: 24 Hour
Replicate 119.871498237187
Replicate 219.45440288933
Replicate 323.075009422271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7857.p1 GENE.R_Transcript_7857~~R_Transcript_7857.p1 ORF type:complete len:424 (+),score=65.51,EF-hand_1|PF00036.28|2.8e+02,EF-hand_1|PF00036.28|0.076,EF-hand_1|PF00036.28|0.16,EF-hand_1|PF00036.28|0.00047,EF-hand_1|PF00036.28|0.075,EF-hand_1|PF00036.28|0.009,EF-hand_5|PF13202.2|3.8e+02,EF-hand_5|PF13202.2|0.097,EF-hand_5|PF13202.2|0.052,EF-hand_5|PF13202.2|0.039,EF-hand_5|PF13202.2|0.02,EF-hand_5|PF13202.2|0.0076,EF-hand_7|PF13499.2|0.28,EF-hand_7|PF13499.2|0.0004,EF-hand_7|PF13499.2|8.8e-09,EF-hand_6|PF13405.2|5.5e+02,EF-hand_6|PF13405.2|2.4,EF-hand_6|PF13405.2|0.089,EF-hand_6|PF13405.2|0.31,EF-hand_6|PF13405.2|0.021,EF-hand_6|PF13405.2|5.2,EF-hand_8|PF13833.2|87,EF-hand_8|PF13833.2|1.9,EF-hand_8|PF13833.2|0.0062,EF-hand_8|PF13833.2|5.7,EF-hand_8|PF13833.2|4.5e-05,SPARC_Ca_bdg|PF10591.5|0.34,SPARC_Ca_bdg|PF10591.5|16,SPARC_Ca_bdg|PF10591.5|0.00031 R_Transcript_7857:411-1682(+)
ATGGGTAAGGTGTCAGTGATTCTATACATAACAATAGGCATAGGATTACTCTTCTTCCTCTCCCAATCTCCACGTCAGCACCACCCAAATGACAACCACACCTCCGACCGCCACGTACGCCATCACGGTCACGGCCGTGGTGGGGGGCACCGCCGTCTAAAACTCCGGTCTAACTTCACATTCACCCCATCAGACCACCTCGAACACCACGACCCTCGCCACGACTTTCGCCACGGCCACTTCCACGAGCCCGTGGCCTTCGATCCCGTCGTCGCCGAGATGGAGCGCCACCGCGAGGACAAGCAGTGGGAGCGCATGTACTTCGATGAACACCACCACAAAGATTTCTCAGACATTGCCAGGCAACAAGACCACCATAGTAATAATCATCATCATCATGAGGGTGGTGGTGATGATCATGCGCCGGGGTACGAGCACCAGCCGGAATGGGAGGACTTTATGGATGCTGAAGATTACCTGAATGATGAAGAGCGGTTCAATGTTACTAATAGGCTATTGCTTTTGTTCCCCAAGATTGATGTGGACCCCATTGATGGGTTTGTCTCAGAAAAGGAGCTCACTCATTGGCATCTTGAACAAGCTCTCAAGGAGGTCATGCATCGTACTCAGAGAGAGATGGAGGTTCATGATAAGAACCGTGATGGGTTTGTTTCTTTCACTGAGTATGAGCCCCCCAGCTGGGTCAAGAGCTCAGATAATAACACATTTGGGTATGATATGGGCTGGTGGAAAGAAGAACACTTCAATGCTTCTGATCTGAATGGAGATGGTCTTCTAAACATAACGGAGTTCAATGACTTTCTGCACCCTGCTGATACCGAAAATCCAAAGTTACTTCAGTGGCTGTGCAAGGAGGAAATCAGGGAAAGAGACACTGATAAAGATGGCAAGGTCGACTTCAACGAATTTTTCCATGGGGTTTTCGATCTGGTGAAAAATTATGATGAGGATGCACACAATTTTACGCATCCTTCGGATGATGATACACCTGCCGCTAGGAAGTTGTTTAATCAGCTCGATGGAGATGGTGATGGTCTTTTGACAGACACGGAGTTGTTACCTATTATTGGTAAACTTCATCCCTCCGAGCACCACTACGCCAAACAACAGGCAGATTATATCATATCACAGGCTGATGCAGATAAAGATGGACGCCTTTCCCTGGATGAGATGATCGAGAATCCTTATGTATTCTATAGTACTATTTTCAGTGATGAAGATGACTATGACTACCACGACGAGCTTCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7857.p1 GENE.R_Transcript_7857~~R_Transcript_7857.p1 ORF type:complete len:424 (+),score=65.51,EF-hand_1|PF00036.28|2.8e+02,EF-hand_1|PF00036.28|0.076,EF-hand_1|PF00036.28|0.16,EF-hand_1|PF00036.28|0.00047,EF-hand_1|PF00036.28|0.075,EF-hand_1|PF00036.28|0.009,EF-hand_5|PF13202.2|3.8e+02,EF-hand_5|PF13202.2|0.097,EF-hand_5|PF13202.2|0.052,EF-hand_5|PF13202.2|0.039,EF-hand_5|PF13202.2|0.02,EF-hand_5|PF13202.2|0.0076,EF-hand_7|PF13499.2|0.28,EF-hand_7|PF13499.2|0.0004,EF-hand_7|PF13499.2|8.8e-09,EF-hand_6|PF13405.2|5.5e+02,EF-hand_6|PF13405.2|2.4,EF-hand_6|PF13405.2|0.089,EF-hand_6|PF13405.2|0.31,EF-hand_6|PF13405.2|0.021,EF-hand_6|PF13405.2|5.2,EF-hand_8|PF13833.2|87,EF-hand_8|PF13833.2|1.9,EF-hand_8|PF13833.2|0.0062,EF-hand_8|PF13833.2|5.7,EF-hand_8|PF13833.2|4.5e-05,SPARC_Ca_bdg|PF10591.5|0.34,SPARC_Ca_bdg|PF10591.5|16,SPARC_Ca_bdg|PF10591.5|0.00031 R_Transcript_7857:411-1682(+)
MGKVSVILYITIGIGLLFFLSQSPRQHHPNDNHTSDRHVRHHGHGRGGGHRRLKLRSNFTFTPSDHLEHHDPRHDFRHGHFHEPVAFDPVVAEMERHREDKQWERMYFDEHHHKDFSDIARQQDHHSNNHHHHEGGGDDHAPGYEHQPEWEDFMDAEDYLNDEERFNVTNRLLLLFPKIDVDPIDGFVSEKELTHWHLEQALKEVMHRTQREMEVHDKNRDGFVSFTEYEPPSWVKSSDNNTFGYDMGWWKEEHFNASDLNGDGLLNITEFNDFLHPADTENPKLLQWLCKEEIRERDTDKDGKVDFNEFFHGVFDLVKNYDEDAHNFTHPSDDDTPAARKLFNQLDGDGDGLLTDTELLPIIGKLHPSEHHYAKQQADYIISQADADKDGRLSLDEMIENPYVFYSTIFSDEDDYDYHDELR*

Click here to download the sequence:
Link to NCBI Protein BLAST