Transcript Information: R_Transcript_78617.p3


Annotated TAIR IDAT3G52040.1
Annotated Gene Nameunknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19304368-19304802 | Reverse length=90
E-Value1.1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.11974105236
Replicate 228.631318749497
Replicate 322.906737596152
Condition 2: 8 Hour
Replicate 123.651119551316
Replicate 216.770661380889
Replicate 314.851317780317
Condition 3: 24 Hour
Replicate 124.523112265957
Replicate 227.067817729345
Replicate 322.136428603794


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78617.p3 GENE.R_Transcript_78617~~R_Transcript_78617.p3 ORF type:complete len:88 (+),score=14.24,DUF2462|PF09495.6|8.6e-09 R_Transcript_78617:204-467(+)
ATGACGCAAAAGGCGGATATGTTCAAAGGTAAACAAAAGAAAAGGAATATCCCTCCCAGTCGCCATGGCAAGGCTCCCCAAACTCGCAAAGGTAAGAGGCAGATTAAGCCGTCAAAGATCACCGCCGACATGGATACTAATCGGGAGGTAAGCAAGTTCATCAATTACTGCAATGAGGTTAAAGCAGCTACTGCTGCTTGCAAGGAAGGAGGGCAACTTAGCATTATTAAGCCATCCCAAGAATCATTAGAAGGTGCAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78617.p3 GENE.R_Transcript_78617~~R_Transcript_78617.p3 ORF type:complete len:88 (+),score=14.24,DUF2462|PF09495.6|8.6e-09 R_Transcript_78617:204-467(+)
MTQKADMFKGKQKKRNIPPSRHGKAPQTRKGKRQIKPSKITADMDTNREVSKFINYCNEVKAATAACKEGGQLSIIKPSQESLEGAK*

Click here to download the sequence:
Link to NCBI Protein BLAST