Transcript Information: R_Transcript_78664.p1


Annotated TAIR IDAT4G39380.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: TSL-kinase interacting protein 1 (TAIR:AT2G36960.2).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18309628-18311874 | Reverse length=534
E-Value2.6E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3233501953518
Replicate 26.5088531290524
Replicate 37.0094617044226
Condition 2: 8 Hour
Replicate 16.3663248862838
Replicate 27.6921433533678
Replicate 39.9833858412128
Condition 3: 24 Hour
Replicate 18.2648106019735
Replicate 28.0281142361701
Replicate 37.7920228685355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78664.p1 GENE.R_Transcript_78664~~R_Transcript_78664.p1 ORF type:complete len:500 (+),score=94.04 R_Transcript_78664:196-1695(+)
ATGAAAACTACTAAGCAACAAAAGGCAAAGGGAGAACAGGTTTCCACTCAAAGGAATATCAATAAGAATCTTATTGGTGGCAAGAAATCTCGCAGAAGCTCAGGACAGTGCCATAAAGCATCAGTTGGAAAAGAAAATCTCCCAACAACACGTAGACTTTCTCCTGAACATGGTCACTGTTATTCAGGTGATCGGGCAGATCCTGCTCTATCTAGCAGTAATATAATCTCAGATATGAAGCAGGAAGATCAAATGCTTCATTCCTATGCTAAAATCAAGCTGCAGCTTTTCCCATTAGATGACAGAATTCGTCATGGATTGGAGAAGGATGGTCATAATCCATTCTTGGAGTTGACTTTAAGAGCGCGGAAAAAGATCACATCTGTAATTGAGCATCTATGCAACAAATGGGGTAGTTCAAGCATAGCGATGGGGGAATTGATGCTTTTTCCCTTTAATGGTGCAGTGGACAATATGACAACTTATAAACAATGGTGTTCACGTGACATTGGGATTAGTGCAGGAGATGTTCATGCTGCTATTGGGAGTCCAGAAAATTTTCGCTTGAGGTATGGCTGGATTTCCACACAACCGAGCAGTTCATACTCATCTCCCTCTTTGTGTGGCACGGAGCCTGTTCATTTGGAAAGGGCTTCTAACAATGCCATGGACACTACAAGTGGTACCAAGATTCAGACAGAGGAGAATAGCAAAGATTTAAATCCATGCAATACTAGTGAAGGGACGACCGAGGCAGTTGAGCAGACAGTTACTTCTGCATCTCATGGGGAGGTCCAAATGAATCAGGCAGAGGTAAATAATGAATACATCAAGGCAAGCAAGATTAGCAAAATAGAAAATGAAACCATGATTAAAGGAAAGGCTTCAGCTGAGCCACCTAAAGATGAGGGATCAGAGATGCCGAATGATTCCTTCACATCACTCCTCTGGTCTGATTTAAGTAATATAAGTATTGGAGGTCTTCTGTCCGAGGCGTCTTTGCAGGGAACATTCAACACTCAAGATACGAAACTAGGAAGTGGCAGATTGGCATCTCAGCCTACTACAGTTGTTTCTGAATCACTGGATGCTTTTATCAACCAATTAAACAGCCATCAAGCTCCACCTACTCTCTCTCCTGACATGCCATCATCTATCTTCAATGCTGAAGACACTTGCCATTCTTTTGCATTTTCCAAACCCTCGGGTTCAGCCAAAGATTTTCTTACTCTGGGTCGAAGCTCTTTTTCTGGGTTGTCTAGCCAGGTTGTTGCTCCCAGCTCATCAAAATGTCCCAAATTCGAGGTAAATAAACACGGAAGCAATGTTCAGGAACCGAAAACAGATTCACTGCCGTTCTCAGGAGTATACAACAATGAAAACAGTTTGGGCTTATCCAGCATTAGATGGAATGACTCTTTGGGACCATTTGATATTCCCTTAACAACACGACAAATTATCAAGGACGACAGTGTTGGTAATGGCAGATTTGTCAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78664.p1 GENE.R_Transcript_78664~~R_Transcript_78664.p1 ORF type:complete len:500 (+),score=94.04 R_Transcript_78664:196-1695(+)
MKTTKQQKAKGEQVSTQRNINKNLIGGKKSRRSSGQCHKASVGKENLPTTRRLSPEHGHCYSGDRADPALSSSNIISDMKQEDQMLHSYAKIKLQLFPLDDRIRHGLEKDGHNPFLELTLRARKKITSVIEHLCNKWGSSSIAMGELMLFPFNGAVDNMTTYKQWCSRDIGISAGDVHAAIGSPENFRLRYGWISTQPSSSYSSPSLCGTEPVHLERASNNAMDTTSGTKIQTEENSKDLNPCNTSEGTTEAVEQTVTSASHGEVQMNQAEVNNEYIKASKISKIENETMIKGKASAEPPKDEGSEMPNDSFTSLLWSDLSNISIGGLLSEASLQGTFNTQDTKLGSGRLASQPTTVVSESLDAFINQLNSHQAPPTLSPDMPSSIFNAEDTCHSFAFSKPSGSAKDFLTLGRSSFSGLSSQVVAPSSSKCPKFEVNKHGSNVQEPKTDSLPFSGVYNNENSLGLSSIRWNDSLGPFDIPLTTRQIIKDDSVGNGRFVR*

Click here to download the sequence:
Link to NCBI Protein BLAST