Transcript Information: R_Transcript_78684.p2


Annotated TAIR IDAT2G32630.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13844834-13846708 | Forward length=624
E-Value1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4416357355699
Replicate 21.2018084413369
Replicate 32.2366848157859
Condition 2: 8 Hour
Replicate 12.0610997430341
Replicate 23.6138798935249
Replicate 35.6227211349347
Condition 3: 24 Hour
Replicate 13.2465585978571
Replicate 22.4505843211753
Replicate 33.8321907195915


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78684.p2 GENE.R_Transcript_78684~~R_Transcript_78684.p2 ORF type:complete len:297 (+),score=52.64,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|0.92,PPR_2|PF13041.2|2e-13,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|1,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|2.7e+02,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.011,PPR|PF01535.16|48,PPR|PF01535.16|0.0084,PPR|PF01535.16|0.0024,PPR|PF01535.16|9.2,PPR_1|PF12854.3|14,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|0.0049 R_Transcript_78684:954-1844(+)
ATGTCCATTGGGAAACTAGCCAAGGCCTTTAACAATCATCTCCCTTCTCATCTAAAATCCAACCAAGAAATTGCAGAGCAGATTTCCAAAACTCTAATAGCTTCTTCAGGCTTCAAACCTTTAAAAAATGAACATTTAATTAGCAATATCGATCCTAATATAACTCACCTTGTTATCTCAAACCCAATCATCCCTCCTACTACTTGCTTGCAATTCTTCAATTTCCTGCAAAGAAACCAATCATTTTCTTCCCAAAGGCCTAATCTTTGTGCCCATGTTGGTCTAATTTTTAGACTATTGGGAGCCAGAAAGTTTGCCGTTGCTAAAAATATGTTGAATTCTGTGTGTATTGATGAAAATCTAAGGTGCCCAATTTTAGAAATGGCTTCAATTGTGCAAAAATGCGGCCAAAGTGGTAGAATTGTAGAAAAATTTTATGATATGCTGATGAGGGTTTGTGCAGATAATAGACAATTTGATTATGCCTTCCAGGTGTTTGACTATATGACTGAAAGTGGGTTTGATATTGAGGAGAGGTCTTGTATGGTTTGTTTGGTTGCTATGAAGAGGGCTGGGGAATTTGAGTTGGTAATCAAGTTTTTTACTAAGATGGTTGACTTGGCTGTTGAGATAACTGTGTATTCATTGTCTCTTGTGATTGATTGCTTGTGCAAGGGAGGGGAGGTTGAGAAGGCTAAACAATTGATGTCTGAAGTTGGTAAATGTGTTAACCCAAATGTGTATGCATACAACTCATTGTTAGAGTTTTATGTTAGAAAGCATGAGTTTGAGGAAGCTGATGGAGTATTAAAGCTAATGGAGAAAGCAAATGTAGCACCCAATGCTGCAACTTATACAATCCTTATTGATGGGTATACCAATGATGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78684.p2 GENE.R_Transcript_78684~~R_Transcript_78684.p2 ORF type:complete len:297 (+),score=52.64,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|0.92,PPR_2|PF13041.2|2e-13,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|1,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|2.7e+02,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.011,PPR|PF01535.16|48,PPR|PF01535.16|0.0084,PPR|PF01535.16|0.0024,PPR|PF01535.16|9.2,PPR_1|PF12854.3|14,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|0.0049 R_Transcript_78684:954-1844(+)
MSIGKLAKAFNNHLPSHLKSNQEIAEQISKTLIASSGFKPLKNEHLISNIDPNITHLVISNPIIPPTTCLQFFNFLQRNQSFSSQRPNLCAHVGLIFRLLGARKFAVAKNMLNSVCIDENLRCPILEMASIVQKCGQSGRIVEKFYDMLMRVCADNRQFDYAFQVFDYMTESGFDIEERSCMVCLVAMKRAGEFELVIKFFTKMVDLAVEITVYSLSLVIDCLCKGGEVEKAKQLMSEVGKCVNPNVYAYNSLLEFYVRKHEFEEADGVLKLMEKANVAPNAATYTILIDGYTNDV*

Click here to download the sequence:
Link to NCBI Protein BLAST