Transcript Information: R_Transcript_78689.p1


Annotated TAIR IDAT2G32630.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13844834-13846708 | Forward length=624
E-Value2.1E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5109647307991
Replicate 25.1850619930492
Replicate 33.5617183457432
Condition 2: 8 Hour
Replicate 15.4495979913076
Replicate 26.6809951842567
Replicate 37.5816178505885
Condition 3: 24 Hour
Replicate 15.8794384363632
Replicate 24.7741566500945
Replicate 34.2040408392516


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78689.p1 GENE.R_Transcript_78689~~R_Transcript_78689.p1 ORF type:complete len:328 (+),score=74.57,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|4.9e-16,PPR_2|PF13041.2|6.3e-08,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|8.7,PPR_2|PF13041.2|6.6e-11,PPR_2|PF13041.2|2.8e-19,PPR_2|PF13041.2|9.6e-11,PPR_2|PF13041.2|1.7e-15,PPR_1|PF12854.3|6.4e-07,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|4.9e-11,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|5e-10,PPR_1|PF12854.3|6.8e-13,PPR_1|PF12854.3|1.2e-09,PPR_1|PF12854.3|2.2e-09,PPR_1|PF12854.3|9.1,PPR|PF01535.16|7.5e+02,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|4e-07,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|0.087,PPR|PF01535.16|5.3e-09,PPR|PF01535.16|3.3e-09,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|1.6e+04,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|9.3e-05,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|38,PPR_3|PF13812.2|2.2e-07,TPR_14|PF13428.2|9e+03,TPR_14|PF13428.2|99,TPR_14|PF13428.2|2.7e+03,TPR_14|PF13428.2|12,TPR_14|PF13428.2|0.62,TPR_7|PF13176.2|84,TPR_7|PF13176.2|1.7e+03,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|1.4,TPR_7|PF13176.2|2.3e+03,TPR_7|PF13176.2|3.3,TPR_12|PF13424.2|5.5e+02,TPR_12|PF13424.2|4e+02,TPR_12|PF13424.2|3.9e+03,TPR_12|PF13424.2|4.6e+02,TPR_12|PF13424.2|1.9,TPR_12|PF13424.2|19 R_Transcript_78689:1267-2250(+)
ATGCTGCAACTTATACAATCCTTATTGATGGGTATACCAATGATGTGTGAAGATGTGTATGTGAAGATGTGTGAAAAAGGTAAGGAGGGAGATGTGCATTTGTACACAGCAATGATCAATCTTTTTTGTAGGAAAGAAGATATGAAGAGAGCATGTAGTCTGTTTGATGAAATGGTTGAGAAAGGCCTTTATCCGAGTGCTCACAGTTATGGGGCTTTGGTAAATGGTTTATGCAGAGCTGGGCAGTTGGAGGCTGCTGAGACACTTGTAAATGAGATGCAAAGCAGAGGGCTGAATTTGAATAAGGTGATATTTAATACTTTGATAGATGGTTATTGCAAAAGAGGAATGATCAATGAAGCACTTAGGCTAAAGGATGTCATGGAAAGGAAAGGATTGGTGCCTGATGCATATGCCTACAATATTATTGCAAGTGGGTTTCGTACCTTGAATAAAAACGAGGAAGCCAAGAGGTTCTTGTACATGATGTTAGAGAAGGGATTTTTGTTGAATATTGTGAATTATTGTACTTTGATTGACATATATTGTAAGGAAGGAAACTTTGCTGAAGCAAAGAGGCTTTTCGAGGAGATGGAGAAGAAGGGTGTCGGCCCTAGTGTTGTAGCTTACAATACTTTGATTGATGGGTATTGCAAGAAAGGCGAATTGAAAGAAGCCCAAAAGCTCAAGGAAGAAATGGTGGATAAGAAATTAATGCCAGATGTCTACACATACACATCACTTATACATGGTGAATGTATACATGGAAAAGTGGATTGTGGATGGGAACTGTTTAATGAGATGTCAGCTATGGGGTTGGTCCAGAATGTAGTGACTTACACAGCAATGATCACAGGCTTGTCTAAGGAGGGAAGATCAGATGAAGCATTCAAGTTATATGAACAAATGTTGGAGGCTGGCGTTACCCCAGACAATACGGTGTATACTACACTTGTGGGTAGCCTTCATTCAGCTGAACCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78689.p1 GENE.R_Transcript_78689~~R_Transcript_78689.p1 ORF type:complete len:328 (+),score=74.57,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|4.9e-16,PPR_2|PF13041.2|6.3e-08,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|8.7,PPR_2|PF13041.2|6.6e-11,PPR_2|PF13041.2|2.8e-19,PPR_2|PF13041.2|9.6e-11,PPR_2|PF13041.2|1.7e-15,PPR_1|PF12854.3|6.4e-07,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|4.9e-11,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|5e-10,PPR_1|PF12854.3|6.8e-13,PPR_1|PF12854.3|1.2e-09,PPR_1|PF12854.3|2.2e-09,PPR_1|PF12854.3|9.1,PPR|PF01535.16|7.5e+02,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|4e-07,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|0.087,PPR|PF01535.16|5.3e-09,PPR|PF01535.16|3.3e-09,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|1.6e+04,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|9.3e-05,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|38,PPR_3|PF13812.2|2.2e-07,TPR_14|PF13428.2|9e+03,TPR_14|PF13428.2|99,TPR_14|PF13428.2|2.7e+03,TPR_14|PF13428.2|12,TPR_14|PF13428.2|0.62,TPR_7|PF13176.2|84,TPR_7|PF13176.2|1.7e+03,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|1.4,TPR_7|PF13176.2|2.3e+03,TPR_7|PF13176.2|3.3,TPR_12|PF13424.2|5.5e+02,TPR_12|PF13424.2|4e+02,TPR_12|PF13424.2|3.9e+03,TPR_12|PF13424.2|4.6e+02,TPR_12|PF13424.2|1.9,TPR_12|PF13424.2|19 R_Transcript_78689:1267-2250(+)
MLQLIQSLLMGIPMMCEDVYVKMCEKGKEGDVHLYTAMINLFCRKEDMKRACSLFDEMVEKGLYPSAHSYGALVNGLCRAGQLEAAETLVNEMQSRGLNLNKVIFNTLIDGYCKRGMINEALRLKDVMERKGLVPDAYAYNIIASGFRTLNKNEEAKRFLYMMLEKGFLLNIVNYCTLIDIYCKEGNFAEAKRLFEEMEKKGVGPSVVAYNTLIDGYCKKGELKEAQKLKEEMVDKKLMPDVYTYTSLIHGECIHGKVDCGWELFNEMSAMGLVQNVVTYTAMITGLSKEGRSDEAFKLYEQMLEAGVTPDNTVYTTLVGSLHSAEP*

Click here to download the sequence:
Link to NCBI Protein BLAST