Transcript Information: R_Transcript_78726.p1


Annotated TAIR IDAT3G59280.1
Annotated Gene NameProtein Transporter, Pam16
Annotated Gene Symbol(s)TXR1
Annotation TypeOrtholog
Chromosome Positionchr3:21909266-21910519 | Reverse length=116
E-Value2.7E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3372693905432
Replicate 20
Replicate 32.0951284386725
Condition 2: 8 Hour
Replicate 10
Replicate 21.9088557669305
Replicate 34.8699443127867
Condition 3: 24 Hour
Replicate 13.0797058476188
Replicate 21.2103495732634
Replicate 35.4719261717243


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78726.p1 GENE.R_Transcript_78726~~R_Transcript_78726.p1 ORF type:complete len:164 (+),score=31.48,Pam16|PF03656.9|2.8e-22 R_Transcript_78726:50-541(+)
ATGCTTCGGAGAGAGACATCAAAACATATAAGGGTTCGCTTCTCCTATTCGTCGCCTCTCTTCTGTTCCTTTGTACTTCTTCCTAGTACTCCCATTGATCCAAGGACAAGATCTTTGTGGGACTTTATTAGTTTCTCTTCAATGGCTGCGAGAATAATCGCTCAATTACTTGTCGTAGGTTCTGGGGTTTTAGTTAGAGCTTTTACTCAAGCTTATCGTCAAGCTCTTGCAAATGCTTCTAAAACTGGAGCTGCTCAAGAAGCAATGCAGAATACAGTCCGGCGGGCGAGTAGAGCCATCACAGAGCAAGAGGCAAGGCAGATTCTTGGTGTCACTGAGAATAGTGCGTGGGAAGAGATTTTGAAGAAATATGATGTTTTGTTTGAGAGTAATGCCAAGCAAGGGAGCTTCTACCTCCAGTCAAAGGTCCATCGAGCCAAGGAGTGTTTAGAGCCTTTATATCAGAACAAAGGTCAGAGTTCTGCTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78726.p1 GENE.R_Transcript_78726~~R_Transcript_78726.p1 ORF type:complete len:164 (+),score=31.48,Pam16|PF03656.9|2.8e-22 R_Transcript_78726:50-541(+)
MLRRETSKHIRVRFSYSSPLFCSFVLLPSTPIDPRTRSLWDFISFSSMAARIIAQLLVVGSGVLVRAFTQAYRQALANASKTGAAQEAMQNTVRRASRAITEQEARQILGVTENSAWEEILKKYDVLFESNAKQGSFYLQSKVHRAKECLEPLYQNKGQSSAN*

Click here to download the sequence:
Link to NCBI Protein BLAST