Transcript Information: R_Transcript_78728.p1


Annotated TAIR IDAT3G59280.1
Annotated Gene NameProtein Transporter, Pam16
Annotated Gene Symbol(s)TXR1
Annotation TypeOrtholog
Chromosome Positionchr3:21909266-21910519 | Reverse length=116
E-Value6.6E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.90894403753
Replicate 213.442753315313
Replicate 312.989796319769
Condition 2: 8 Hour
Replicate 19.5554594916079
Replicate 214.316418251979
Replicate 314.499152385797
Condition 3: 24 Hour
Replicate 114.978569349783
Replicate 214.120745021406
Replicate 312.011545255005


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78728.p1 GENE.R_Transcript_78728~~R_Transcript_78728.p1 ORF type:complete len:164 (+),score=36.13,Pam16|PF03656.9|1.1e-21 R_Transcript_78728:87-578(+)
ATGCTTCGAAGAGAGACGTCAAAACAAATAAGGGTTCGCTTCTCCCATTCGTCGCCTTCCCTTGTACTTCTTTCTAATTCTCCCATTGATCCCATTGATCCAAAGACAAGATCATTGTGGGACTTTATTAGTTTCCCTTCAATGGCTTCAAAAATAATCGCTCAATTACTTGTCGTTGCTTCTGGGGTTTTAGTTAGAGCTTTTACTCAAGCTTATCGTCAAGCTCTTGCAAATGCTTCTAAAACTGGAGCTGCTCAAGAAGCAATGCAGAATACAGTCCGGCGGGCGAGTAGAGCCATCACAGAGCAAGAGGCAAGGCAGATTCTTGGTGTCACTGAGAATAGTGCGTGGGAAGAGATTTTGAAGAAATATGATGTTTTGTTTGAGAGTAATGCCAAGCAAGGGAGCTTCTACCTCCAGTCAAAGGTCCATCGAGCCAAGGAGTGTTTAGAGCCTTTATATCAGAACAAAGGTCAGAGTTCTGCTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78728.p1 GENE.R_Transcript_78728~~R_Transcript_78728.p1 ORF type:complete len:164 (+),score=36.13,Pam16|PF03656.9|1.1e-21 R_Transcript_78728:87-578(+)
MLRRETSKQIRVRFSHSSPSLVLLSNSPIDPIDPKTRSLWDFISFPSMASKIIAQLLVVASGVLVRAFTQAYRQALANASKTGAAQEAMQNTVRRASRAITEQEARQILGVTENSAWEEILKKYDVLFESNAKQGSFYLQSKVHRAKECLEPLYQNKGQSSAN*

Click here to download the sequence:
Link to NCBI Protein BLAST