Transcript Information: R_Transcript_78742.p1


Annotated TAIR IDAT4G18840.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10338719-10340356 | Reverse length=545
E-Value2.9E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8219221655357
Replicate 21.4359761837394
Replicate 31.1855612803924
Condition 2: 8 Hour
Replicate 10.95046795543835
Replicate 20.99197997077348
Replicate 31.5769421426214
Condition 3: 24 Hour
Replicate 10.97602507622402
Replicate 21.4676327542713
Replicate 31.9824353598114


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78742.p1 GENE.R_Transcript_78742~~R_Transcript_78742.p1 ORF type:complete len:541 (+),score=117.16,PPR|PF01535.16|0.0083,PPR|PF01535.16|0.0022,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|2e+03,PPR|PF01535.16|1,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0049,PPR|PF01535.16|0.095,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|3.4,PPR_2|PF13041.2|5.8e-06,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|8.9e-09,PPR_2|PF13041.2|0.0015,PPR_2|PF13041.2|4.9e-12,PPR_2|PF13041.2|2.5e+02,PPR_2|PF13041.2|5.5e-11,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|3.7e+02,PPR_2|PF13041.2|3.3e+02,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.068,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|70,PPR_3|PF13812.2|0.86,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|4,PPR_1|PF12854.3|17,PPR_1|PF12854.3|6.8e+03,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|0.00033,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|4.2 R_Transcript_78742:123-1745(+)
ATGGAAATATCCACAAGCCATGTCCCGGCAATATTGTCCTTCACAGACAAGGCAAACGCAATCTCAGAGCTCCAACAAGCTCATGCCCATATGCTCAAAACTGGTCTAATCAATGACACTTACGCAGCTAGTCGCTTAGTAGCATTTGCTGCCACCAATCCTGAACCTCAAACCATATCCTATGCTCACTCTATTTTCTCTGTCATCAACAACCCCAACTCATTTATTTGGAATTCCCTCATCAGGGCACATGCCAATAGCTCAAACCCACAAAATTCCCTTCTTCTTTTCAGCCAAATGTTGGGTAGTGGAACTGTATTTCCCGACAAGTACACTTACCCTTTTGTCCTTAAGGCATGTTCTGGTCTTGGTGGGGTCAAAGAGGGTAAACAAGTTCATGGGCATGTTGTGAAATGTAAGGAGATTAGGGATGATGTTTATGTGCAGAATACTTTGATTAGTATGTATGCTAATTTTGGGTGTTTTGAACTTGCACGTAAGGTGCTCGATAGAATGCCCCAAAGGGATGTTATTTCCTGGAATGCTATGTTGAGTGCTTATGTGGAGAAGGGTATGATGGAGGAATCATGGGTTTTGTTTAATGAGATGGGGGAAAGGAATGTGGAGTCTTGGAACTTCATGGTATCTGGGTTTGCTGGGTTGGGTTTGGTTGAGGATGCTAGAAGGGTTTTTGATGAGATGCCTGTGAAAGATGTTGTCTCTTGGAATGCCATTATTTCAGGGTATGCGCATGTGGGTATTTTGGATGAAGTTTTGGTTCTTTTCGAGGACATGCTAAGTGAGAATATTAAGCCTGATAAGTATACTTTGGTGAATGTTTTATCAGCTTGTGCTCATCTTGGAGCTTTGAGACAAGGGGAATGGATTCATGCATACATAGATAGGAATGGGATTGGTGTTAAAGGTTTTCTAGCCACTGCACTAGTGGACATGTATTCCAAATGTGGGAGCATTGGAAATGCTTTGGAAGTGTTTAGTAACACCTTAGAGAAAGATGTTAGTACTTGGAACTCGATGATTGGAGGTTTAAGCATCAACAGTTATGGTGAGCAGGCAGTTGGGGTGTTTCATGAGATGATACAGGATGGTTGTCGACCAAATGAGGTGACCTTTATAAATGTTCTATCTGCTTGCAGCCATGCGGGTTTGTTAAATGAGGGTCTTGATATATTTGATCGTATGATCCATAGTTATGGGATTCAGTCTACAATCGAACACTATGGATGCATGGTCGATCTGCTTGGTCGAGCTGGATTACTAGAAGAGGCAAAGGACTTTTTAAGTTTGGTTCCAGATAACAATTCACTGGTATTGTGGCAGTCTCTTCTGGCTTCCTGTAGAAACCATGACAATGTCGAGCTAGCACGAGAAGTTGCTGCAAAGCTATTAGAACTGGACCCTAATGACAATGCTGGTTACGTTCAGCTGTCAAATGTGTATGCATCCACAGGAAAATGGAAAAATGTTGCCGAAGTGAGGAAAAAGATGAAGGCACAAGGTGTAAAAAAGGAGCCTGGTTGTAGCATGATCGAAATCGATGGAGTTGTCCATGAGTTTTTAGCAGGTGAAGGTTTGTTTCCTGATTTAGTTGGTTCTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78742.p1 GENE.R_Transcript_78742~~R_Transcript_78742.p1 ORF type:complete len:541 (+),score=117.16,PPR|PF01535.16|0.0083,PPR|PF01535.16|0.0022,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|2e+03,PPR|PF01535.16|1,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0049,PPR|PF01535.16|0.095,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|3.4,PPR_2|PF13041.2|5.8e-06,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|8.9e-09,PPR_2|PF13041.2|0.0015,PPR_2|PF13041.2|4.9e-12,PPR_2|PF13041.2|2.5e+02,PPR_2|PF13041.2|5.5e-11,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|3.7e+02,PPR_2|PF13041.2|3.3e+02,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.068,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|70,PPR_3|PF13812.2|0.86,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|4,PPR_1|PF12854.3|17,PPR_1|PF12854.3|6.8e+03,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|0.00033,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|4.2 R_Transcript_78742:123-1745(+)
MEISTSHVPAILSFTDKANAISELQQAHAHMLKTGLINDTYAASRLVAFAATNPEPQTISYAHSIFSVINNPNSFIWNSLIRAHANSSNPQNSLLLFSQMLGSGTVFPDKYTYPFVLKACSGLGGVKEGKQVHGHVVKCKEIRDDVYVQNTLISMYANFGCFELARKVLDRMPQRDVISWNAMLSAYVEKGMMEESWVLFNEMGERNVESWNFMVSGFAGLGLVEDARRVFDEMPVKDVVSWNAIISGYAHVGILDEVLVLFEDMLSENIKPDKYTLVNVLSACAHLGALRQGEWIHAYIDRNGIGVKGFLATALVDMYSKCGSIGNALEVFSNTLEKDVSTWNSMIGGLSINSYGEQAVGVFHEMIQDGCRPNEVTFINVLSACSHAGLLNEGLDIFDRMIHSYGIQSTIEHYGCMVDLLGRAGLLEEAKDFLSLVPDNNSLVLWQSLLASCRNHDNVELAREVAAKLLELDPNDNAGYVQLSNVYASTGKWKNVAEVRKKMKAQGVKKEPGCSMIEIDGVVHEFLAGEGLFPDLVGSE*

Click here to download the sequence:
Link to NCBI Protein BLAST